Pairwise Alignments

Query, 249 a.a., RNA methyltransferase, TrmH family, group 3 (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 280 a.a., 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  116 bits (291), Expect = 4e-31
 Identities = 72/241 (29%), Positives = 120/241 (49%), Gaps = 3/241 (1%)

Query: 10  GLKPVLELLASDPARIDTVFIRRGRRTPDTDRLMDLCREMRVRFSLVEGQVLDKLYAGGH 69
           G +P+LE  A+    ++ VF+ RG R   TD ++   +   V   +V  + LD+L    H
Sbjct: 29  GSRPILEAFAAGK-ELEKVFLLRGSRNSTTDEIVAQAKRFEVPVVMVPVEKLDRLTRKNH 87

Query: 70  QGVVARLFEAGYVELDDLLQDA-PDAPLPLIIALDQVQDPGNAGTLARSLYALGGAGLIV 128
           QG VA +    Y  L++++         PL++ LD+V D  N G++AR+   +G   +++
Sbjct: 88  QGAVAFISPITYQPLNEIITSLFEQGKNPLVLILDRVTDVRNFGSIARNAECMGVDAIVI 147

Query: 129 PRHNAAYLGAGAHRAAAGALEKLPVARVANLARALDEAAEAGYAIYGAM-CGEGSVNAFT 187
           P    A + A A + +AGAL  +PV R  NL   L+   E G+ +       E  ++ + 
Sbjct: 148 PSRGGAQINADAMKTSAGALNIVPVCREPNLKDTLEYLKEYGFQVVACTEKTEHQLSDYA 207

Query: 188 ATLRTPCVLVLGNEDKGIRPNVAKRCDTLLHIPMLRDFDSFNVAQAGALLLGCFAAPLLR 247
             +  P  +++G+E+ GI P   KR D  L IP++    S NV+ A  ++L       LR
Sbjct: 208 VDMVGPTAIIMGSEEDGISPEYLKRADVKLRIPLMGQIGSLNVSVATGIILYEAMIQRLR 267

Query: 248 D 248
           D
Sbjct: 268 D 268