Pairwise Alignments

Query, 249 a.a., RNA methyltransferase, TrmH family, group 3 (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 244 a.a., 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB from Dickeya dianthicola ME23

 Score =  114 bits (284), Expect = 2e-30
 Identities = 82/236 (34%), Positives = 111/236 (47%), Gaps = 8/236 (3%)

Query: 7   VLPGLKPVLELLASDPARIDTVFIRRGRRTPDTDRLMDLCREMR---VRFSLVEGQVLDK 63
           ++ G+  V  LL  DP R   VF  +GR   +  RL  L  E+    +   +   Q LD 
Sbjct: 4   IIYGIHAVKALLEQDPQRFLDVFTLKGR---EDRRLQPLIAELEANGIAVQVANRQWLDD 60

Query: 64  LYAGG-HQGVVARLFEAGYVELDDLLQDAPDAPLPLIIALDQVQDPGNAGTLARSLYALG 122
              G  HQG+VAR+ E    + +DL         P ++ LD V DP N G   RS  A G
Sbjct: 61  KVEGAVHQGIVARVKEGRQYQENDLPGLLASLDTPFLLVLDGVTDPHNLGACLRSADAAG 120

Query: 123 GAGLIVPRHNAAYLGAGAHRAAAGALEKLPVARVANLARALDEAAEAGYAIYGAMCGEGS 182
              +IVPR  +A L A A + A GA E + + RV NLAR L    E    + G   GE  
Sbjct: 121 VHAVIVPRDRSAQLNATAKKVACGAAETVALIRVTNLARTLRFLQEQNVWVVGT-AGEAD 179

Query: 183 VNAFTATLRTPCVLVLGNEDKGIRPNVAKRCDTLLHIPMLRDFDSFNVAQAGALLL 238
              + + L  P  LV+G E +G+R    + CD L+ IPM     S NV+ A  + L
Sbjct: 180 HTLYQSKLTGPLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICL 235