Pairwise Alignments

Query, 249 a.a., RNA methyltransferase, TrmH family, group 3 (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 294 a.a., 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  117 bits (293), Expect = 3e-31
 Identities = 87/234 (37%), Positives = 119/234 (50%), Gaps = 16/234 (6%)

Query: 10  GLKPVLELLASDPARIDTVFIRRGRRTPDTDRLMDLCREMRV---RFSLVEGQVLDKLYA 66
           G  PVL  LAS PAR        GR     +R  ++         R  +V+ Q L ++  
Sbjct: 63  GRHPVLAALAS-PARRGM-----GRLLATAERAAEIENNALANGHRIEVVDIQTLTRMLP 116

Query: 67  GG--HQGVVARLFEAGYVELDDLLQDAPDAPLPLIIALDQVQDPGNAGTLARSLYALGGA 124
            G  HQG+  ++     V L++L + A      +I+ LDQ+ DP N G + RS  A G  
Sbjct: 117 PGAVHQGLAFKVQPLEGVSLEELAEPAEG----VIVMLDQLTDPQNVGAIFRSALAFGAR 172

Query: 125 GLIVPRHNAAYLGAGAHRAAAGALEKLPVARVANLARALDEAAEAGYAIYGAMCGEGSVN 184
           G+IV   +A  L     +AA GA E+LP ARV NL+RAL+  A+ G+   G + G G   
Sbjct: 173 GIIVQDRHAPALAGALAKAAVGATERLPHARVTNLSRALERLADLGWRAVG-LDGTGEQT 231

Query: 185 AFTATLRTPCVLVLGNEDKGIRPNVAKRCDTLLHIPMLRDFDSFNVAQAGALLL 238
              A    P VLV+G+E  GIR  VA+ CD L  IPM   F+S NV+ A A+ L
Sbjct: 232 LEEALDHQPTVLVMGSEGDGIRRLVAEHCDVLAKIPMPGGFESLNVSNAAAVAL 285