Pairwise Alignments

Query, 459 a.a., transcriptional regulatory protein zraR (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 469 a.a., fused DNA-binding response regulator in two-component regulatory system with GlnL: response regulator/sigma54 interaction protein (NCBI) from Escherichia coli BW25113

 Score =  345 bits (885), Expect = 2e-99
 Identities = 198/468 (42%), Positives = 275/468 (58%), Gaps = 18/468 (3%)

Query: 6   VLIVDDDVAHRTMLRTMLRGWGYATDEADDGETAVEKVREKARDAVLMDVRMARMGGIEA 65
           V +VDDD + R +L   L G G      ++G   +E +  K  D +L D+RM  M G+  
Sbjct: 6   VWVVDDDSSIRWVLERALAGAGLTCTTFENGAEVLEALASKTPDVLLSDIRMPGMDGLAL 65

Query: 66  LRRIVEYNPAVPVLIMTAYSSVETAVEALRLGAYDYLTKPLDFDVLRHTLERALDHTRLV 125
           L++I + +P +PV+IMTA+S ++ AV A + GA+DYL KP D D     +ERA+ H +  
Sbjct: 66  LKQIKQRHPMLPVIIMTAHSDLDAAVSAYQQGAFDYLPKPFDIDEAVALVERAISHYQEQ 125

Query: 126 SENRELKSRLDDAARAPGIIGRSAPMRELAELVATVAPSEATVLITGESGTGKELVARSL 185
            + R ++           IIG +  M+++  ++  ++ S  +VLI GESGTGKELVA +L
Sbjct: 126 QQPRNVQLN----GPTTDIIGEAPAMQDVFRIIGRLSRSSISVLINGESGTGKELVAHAL 181

Query: 186 HEGSRRSAKQLVTVNCAALSESLLESELFGHERGAFTGADKRRDGRFVQADGGTLFLDEI 245
           H  S R+    + +N AA+ + L+ESELFGHE+GAFTGA+  R GRF QADGGTLFLDEI
Sbjct: 182 HRHSPRAKAPFIALNMAAIPKDLIESELFGHEKGAFTGANTIRQGRFEQADGGTLFLDEI 241

Query: 246 GELPLLLQAKLLRALQQGEIQRVGSDVPLTVDVRLLAATNRDLREEVAAGRFREDLFYRL 305
           G++PL +Q +LLR L  G+  RVG   P+ VDVR++AAT+++L + V  G+FREDLF+RL
Sbjct: 242 GDMPLDVQTRLLRVLADGQFYRVGGYAPVKVDVRIIAATHQNLEQRVQEGKFREDLFHRL 301

Query: 306 NVIGIHMPALRERPDDIPLLAAHFLDRYAERNRKHLKGFTPQAMDMLLKHPWPGNVRELE 365
           NVI +H+P LRER +DIP LA HFL   A       K   P+    L +  WPGNVR+LE
Sbjct: 302 NVIRVHLPPLRERREDIPRLARHFLQVAARELGVEAKLLHPETEAALTRLAWPGNVRQLE 361

Query: 366 NAVERAVIMATGDWVGERELPMSLRGAGGADPAV--------------ADAALPTGQDPY 411
           N      +MA G  V  ++LP  L  +  A+                 AD AL +G    
Sbjct: 362 NTCRWLTVMAAGQEVLIQDLPGELFESTVAESTSQMQPDSWATLLAQWADRALRSGHQNL 421

Query: 412 AGLSLEDLERRAIVATLRETGDNKSEAARRLGITRATLHNKLKKYDLE 459
              +  +LER  +   LR T  +K EAAR LG  R TL  KLK+  +E
Sbjct: 422 LSEAQPELERTLLTTALRHTQGHKQEAARLLGWGRNTLTRKLKELGME 469