Pairwise Alignments

Query, 459 a.a., transcriptional regulatory protein zraR (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 451 a.a., sigma-54 dependent transcriptional regulator/response regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  354 bits (909), Expect = e-102
 Identities = 202/454 (44%), Positives = 284/454 (62%), Gaps = 9/454 (1%)

Query: 6   VLIVDDDVAHRTMLRTMLRGWGYATDEADDGETAVEKVREKARDAVLMDVRMARMGGIEA 65
           +L+VDD+   R  L  +LR   Y  D A +GE A+  +     D VL D+ M  M G+  
Sbjct: 5   ILVVDDEAIARDNLAILLRKRKYEVDTAANGEEAMRALAGADYDLVLTDLMMDDMDGMAL 64

Query: 66  LRRIVEYNPAVPVLIMTAYSSVETAVEALRLGAYDYLTKPLDFDVLRHTLERALDHTRLV 125
           LR I +++    V+++T Y++VETAV A++ GAY YL KP   +  R  +++AL+   L 
Sbjct: 65  LRHIRQHHADTEVIMITGYATVETAVLAMQEGAYHYLAKPYRIEEARALVQKALEKRALN 124

Query: 126 SENRELKSRLDDAARAPGIIGRSAPMRELAELVATVAPSEATVLITGESGTGKELVARSL 185
            E   L+ +L + +    I+G +  + EL  L+A VAP+EA+VLI GE+GTGKEL AR +
Sbjct: 125 QEVHRLREQLRERSLPVPILGSAPCIVELKRLIAKVAPAEASVLILGETGTGKELAARMV 184

Query: 186 HEGSRRSAKQLVTVNCAALSESLLESELFGHERGAFTGADKRRDGRFVQADGGTLFLDEI 245
           H  SRRS ++ + +NC A +++LLESELFGHE+GAF+GA + + G F  A+GGTLFLDE+
Sbjct: 185 HLFSRRSDRRFLAINCGAFNDALLESELFGHEQGAFSGAARLKKGLFEAAEGGTLFLDEV 244

Query: 246 GELPLLLQAKLLRALQQGEIQRVGSDVPLTVDVRLLAATNRDLREEVAAGRFREDLFYRL 305
           GE+ L +Q KLLR LQ+  I+RVG  V + VDVRL+AATNRDL+ E  AG FR DLFYRL
Sbjct: 245 GEMSLAMQVKLLRTLQERSIRRVGGTVDIPVDVRLVAATNRDLKREAEAGTFRADLFYRL 304

Query: 306 NVIGIHMPALRERPDDIPLLAAHFLDRYAERNRKHLKGFTPQAMDMLLKHPWPGNVRELE 365
           NV+ + MP L ER  DIPLLA +F ++ A   +         A+D L ++P+PGNVREL+
Sbjct: 305 NVVSLRMPPLSERRADIPLLARYFTEKSARDMQVAPPAIGQDALDALARYPFPGNVRELQ 364

Query: 366 NAVERAVIMATGDWVGERELPMSLRGAGGADPAVADAALPTGQDPYAGLSLEDLERRAIV 425
           N +ERAV++ +   +    LP  L  A   D  +         D    L+L+D ER  I+
Sbjct: 365 NIMERAVVLCSDGVIKAGHLPPDLFEA--PDHVMRG-------DERKALTLDDNERDHIM 415

Query: 426 ATLRETGDNKSEAARRLGITRATLHNKLKKYDLE 459
             L   G N++ AAR LGI RA+L  KLK++ +E
Sbjct: 416 WMLEHAGGNRTLAARLLGIDRASLWRKLKRFGVE 449