Pairwise Alignments

Query, 593 a.a., sensory box histidine kinase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 593 a.a., Alginate biosynthesis sensor protein KinB from Pseudomonas putida KT2440

 Score =  122 bits (307), Expect = 3e-32
 Identities = 110/444 (24%), Positives = 200/444 (45%), Gaps = 20/444 (4%)

Query: 132 VDVNERGMFRRLDRSNLYRN-LTLAGAVVVFLAGTLWAMFLADAVSMRLSHPLRRMAELL 190
           +D+  R   R  DR+ L    L L G VV+ L         A  ++ R   P+  +A+  
Sbjct: 152 LDLITRSEERTRDRALLVSGVLGLMGLVVLVLG-----FITAHNIARRFGQPIEALAKAA 206

Query: 191 KDRPPLGTRLHLPAPQTLEVRILFDEFERQWTRLGELDTVNLNRLLREKRKLEVILESAD 250
                    + LP  Q  E+  L   F      L +    N++ LL  +++L+ +L+S D
Sbjct: 207 DQLGKGNFDVTLPVTQAAELNQLTRRFGLMADALRKHQATNVDELLAGQQRLQAVLDSID 266

Query: 251 DAIIVMDNTGCVAHVSRSMTTLLGMPEHELLGQPWHDLSTMDENYLALRGILRDDLVGK- 309
           D ++++D  G + H++      LG  +  L G    +     E    LR +LR   + + 
Sbjct: 267 DGLLIIDRQGRLEHLNPVAQRQLGWNDSRL-GSSLVEALQRPELEQQLRQVLRGGSLDRP 325

Query: 310 -GEVELTCNGEPRVFIVRRRSLHDGVRTDGGQVFLLGDVTEKKRRESLRSEMMDWISHEL 368
             ++ +  + E R+       +        G V +L DVTE++  E +RSE +   SHEL
Sbjct: 326 PDDLNMEVDEESRLLTYSLTPVSHPQGPILGAVMVLHDVTEQRAFERVRSEFVLRASHEL 385

Query: 369 KTPVQSLGLAAELLGRQ-----DTQDDDMRLLVDTIREDAVRLRTVSRQFMDIARMRVDM 423
           +TPV  + +A  LL  +     + +++D   L++TI E+  RL  +    ++ +R +  +
Sbjct: 386 RTPVTGMHMAFGLLRERVKFPPEAREND---LLETIGEEMQRLTQLINDLLNFSRYQSGL 442

Query: 424 LRLERRDVDMAQRLGAWLTPFRLLAREKGVGMEVDVRQAPAVVSVDEDRFSWVVSNLVAN 483
            +LE     +   L    + F   A  K + +  ++      +  D  +   V+ NL+ N
Sbjct: 443 QKLELAPCAIDDLLDHAQSRFAEQAAHKQIELIKELDPPLPRIQADVAQLDRVLDNLLHN 502

Query: 484 SLQASPRNTTLTVRLTEASGDLTLTVEDEGPGVPRELEERMFEPYSHGRAAGTKLGLVGL 543
           +++ +     + +     +  + ++VED G G+    + R+FEP+      G K G  GL
Sbjct: 503 AIRHTANGGRIRLHARRHAERVIISVEDNGEGISYGQQARIFEPFVQ---VGRKKGGAGL 559

Query: 544 GLAISRTIVEAHGGRLAYERRDGR 567
           GLA+ + IV+ HGGR+    R G+
Sbjct: 560 GLALCKEIVQLHGGRMGVFSRPGQ 583