Pairwise Alignments

Query, 593 a.a., sensory box histidine kinase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 537 a.a., HAMP domain-containing protein from Magnetospirillum magneticum AMB-1

 Score =  111 bits (278), Expect = 7e-29
 Identities = 80/237 (33%), Positives = 121/237 (51%), Gaps = 7/237 (2%)

Query: 344 LGDVTEK--KRRESLRSEMMDWISHELKTPVQSLGLAAELLGRQDTQDDDMRLLVDTIRE 401
           L ++TE   +R +++ +   D ++HE+K P+ SL  A E   R +  D   RL+   + +
Sbjct: 300 LKEMTEALWRRMDAIEAFAAD-VAHEIKNPLTSLRSAVETAARIEDPDKRARLM-SIVLD 357

Query: 402 DAVRLRTVSRQFMDIARMRVDMLRLERRDVDMAQRLGAWLTPFRLLAREKGVGMEVDVRQ 461
           D  RL  +     D + +  +M R E   V +A  L      +R    ++G+  EV+  +
Sbjct: 358 DVGRLDRLISDISDASHIDAEMSRAETGPVALAAMLDTLAEIYRGTCEDRGLRFEVERPE 417

Query: 462 APAV-VSVDEDRFSWVVSNLVANSLQASPRNTTLTVRLTEASGDLTLTVEDEGPGVPREL 520
             A+ V   E R   V+ NL+AN+   SP    + +      G + L VED+GPG+P   
Sbjct: 418 GDALTVQGIESRLVQVLRNLIANAASFSPDGGLIRLAAHRDGGRIALVVEDQGPGIPANK 477

Query: 521 EERMFEPYSHGRAAGTKLGL-VGLGLAISRTIVEAHGGRLAYERRD-GRSLFTVHIP 575
            + +FE +   R  G K G   GLGL+ISR IVEAHGG +  E RD G + FTV IP
Sbjct: 478 LDAIFERFYSERPEGEKFGTHSGLGLSISRQIVEAHGGAIRAENRDEGGARFTVDIP 534