Pairwise Alignments

Query, 1006 a.a., proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 1311 a.a., Transcriptional repressor of PutA and PutP / Proline dehydrogenase / Delta-1-pyrroline-5-carboxylate dehydrogenase from Pseudomonas sp. S08-1

 Score =  401 bits (1030), Expect = e-115
 Identities = 299/894 (33%), Positives = 432/894 (48%), Gaps = 63/894 (7%)

Query: 116  MARQFIIGDNSKEAVKGLAKLRKDGFTFTVDLLGEATVSEEESEAYAQGYHEVVDAIARE 175
            M  QF+ G+   EA+   + +   GF ++ D+LGEA ++EE+++ Y   Y + + AI   
Sbjct: 253  MGEQFVTGETIGEALANASNMESKGFRYSYDMLGEAALTEEDAKRYLASYEQAIHAIG-- 310

Query: 176  QEKWKALPGNGPVEGFDWGATPKVNVSIKPSAL---YSQAKPVDVEGSVRGILSRLVPIY 232
                KA  G G  EG          +SIK SAL   YS+A+   V   +  IL  L  + 
Sbjct: 311  ----KASHGRGIYEG--------PGISIKLSALHPRYSRAQYDRVMDELYPILLGLTKL- 357

Query: 233  RKVVAMGGFLCIDMEQLKYKEMTLELFKRLRSDPEFRHYPHLSIVLQAYLRDTEKDLDDL 292
             K   +G  L ID E+    E++L+L +RL   PE   +  +  V+QAY +     +D +
Sbjct: 358  AKQYDIG--LNIDAEEADRLEISLDLLERLCFAPELAGWNGIGFVIQAYQKRCPYVIDYV 415

Query: 293  LHWARSEKLPIGIRLVKGAYWDYETVIAKQNGWE-IPVWTDKPESDIAYEKLAHRILENS 351
            +  A+  +  + IRLVKGAYWD E   A+  G E  PV+T KP +DI+Y   A ++L   
Sbjct: 416  IDLAKRSRHRLMIRLVKGAYWDSEIKRAQVEGLEGYPVYTRKPYTDISYIACARKLLAVP 475

Query: 352  DIVYFACASHNVRTIAAVMETALALNVPEHRYEFQVLYGMAEPVRKGLKNVAGRV----- 406
            + +Y   A+HN  +++A+ + A   N    +YEFQ L+GM EP+    + V G +     
Sbjct: 476  EAIYPQFATHNAHSLSAIYQIA-GQNYYPGQYEFQCLHGMGEPL---YEQVVGSIKDGKY 531

Query: 407  ----RLYCPYGELIPGMAYLVRRLLENTANESFLRQSFAEGAALERLLENPQKTLHRLLA 462
                R+Y P G     +AYLVRRLLEN AN SF+ +      +L+ L+ +P + + R+ A
Sbjct: 532  NRPCRIYAPVGSHETLLAYLVRRLLENGANTSFVNRIADHSISLKELVLDPVEQVERMAA 591

Query: 463  AR-----PEPRAVEPGPGGLPPFTNDAMIDFTVPDNRKAFVEALADVRSRFGQTVPLYIG 517
                   P PR   P         N   ID        +   AL    +      P+ +G
Sbjct: 592  QEGTLGLPHPRIPLPRDLYGEARLNSEGIDLANEHRLGSLSSALLSSTNTSYVAAPM-LG 650

Query: 518  GRDVTTADLIPTTNPAKPAEVVASICQAGRPEIDDAIAAAKKAALTWRDTSPADRAAYLR 577
            G         P  NPA   ++V  + +A   ++  AI  A+ +   W+ T  A+RAA L 
Sbjct: 651  GDTPNPGPAEPVRNPADHRDLVGHVHEASEADVKSAILCAQASGQIWQSTQAAERAAVLE 710

Query: 578  RAADICRKRIWELSAWQVVEVGKQWDQAYHDVTEGIDFLEYYAREMLRLGAPRRMGRAPG 637
            RAAD     I +L    V E GK +  A  +V E +DFL YYA +           RA G
Sbjct: 711  RAADQMESEIQQLMGLLVRESGKTFANAIAEVREAVDFLRYYAAQ----------ARAFG 760

Query: 638  EHNHLFYQPKGIAAVIAPWNFPFAIAIGMASAAIVTGNPVIFKPSSISSRIGYNLAEVFR 697
              +H   +P G    I+PWNFP AI  G  +AA+  GN V+ KP+  +  I      +  
Sbjct: 761  NDSH---RPLGPVVCISPWNFPLAIFSGQVAAALAAGNTVLAKPAEQTPLIAAQAVRILL 817

Query: 698  EAGLPEGVFNYCPGRSSIMGDYLVEHPDISLICFTGSMEVGLRIQEKAAKVQPGQRQCKR 757
            EAG+P G     PGR   +G  LV    +  + FTGS EV   +Q   A     Q +   
Sbjct: 818  EAGVPPGAVQLLPGRGETVGARLVGDERVRGVMFTGSTEVAGILQRNIAGRLDAQGRTVP 877

Query: 758  VIAEMGGKNATIIDDDADLDEAVLQVLYSAFGFQGQKCSACSRVIVLDAIYDRFIERLVK 817
            +IAE GG NA I+D  A  ++ V+ V+ SAF   GQ+CSA   + V D + DR IE L  
Sbjct: 878  LIAETGGLNAMIVDSSALAEQVVIDVVSSAFDSAGQRCSALRVLCVQDDVADRVIEMLKG 937

Query: 818  AASSIHIGPSEDPSNYMGPVADATLQKNVSDYIRIAEEEGRVLLKRT----DLPAEGCYV 873
            A +   IG  E     +GPV DA  +  +  +I    E+GR + +      D    G +V
Sbjct: 938  AMAEYRIGSPERLHTDIGPVIDAEAKAGIEAHIAAMREKGRKVFQAARADGDEIKRGTFV 997

Query: 874  -PLTIVGDIRPEHRIAQEEIFGPVLAVMR--AATFDEALSIANGTRFALTGAVFSRSPEH 930
             P  I  D   E    + EIFGPVL ++R   A     L   N + + LT  V +R  E 
Sbjct: 998  LPTLIELDSFDE---MKREIFGPVLHLVRYPRAELGNLLQQINDSGYGLTLGVHTRIDET 1054

Query: 931  LDKARREFRVGNLYLNKGSTGALVERQPFGGFAMSGVGSKTGGPDYLLQFMDPR 984
            + +     +VGNLY+N+   GA+V  QPFGG  +SG G K GGP YL + +  R
Sbjct: 1055 IAQVVDSAKVGNLYVNRNIVGAVVGVQPFGGEGLSGTGPKAGGPLYLYRLLSTR 1108