Pairwise Alignments

Query, 389 a.a., efflux transporter, RND family, MFP subunit (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 413 a.a., RND transporter MFP subunit from Pseudomonas simiae WCS417

 Score =  227 bits (578), Expect = 5e-64
 Identities = 126/342 (36%), Positives = 199/342 (58%), Gaps = 4/342 (1%)

Query: 37  PPPKVTVGAPHVGPVTEYMEFSGTIAAVESVDITARVTGTLRSAQFRDGSTVHKGDPLFI 96
           P  KV+V      PV E+ EF+G + A E+V I  RV+G +    F +G+ V KGD LF 
Sbjct: 34  PAAKVSVAKVLEQPVNEWDEFTGRLEAPETVQIRPRVSGQIDQVAFTEGALVKKGDLLFQ 93

Query: 97  IEPEPYQAALQRAEAELEVQQAALARAETELARSRKLLTEKAGSETDVVKWQQQRDSAKA 156
           I+P P+QA ++R EA+L+  +AA  R++ E  R  +L    A S             A+A
Sbjct: 94  IDPRPFQAEVRRLEAQLQQTRAAATRSDNEAQRGERLRQSNAISAELADSRTTAAQEARA 153

Query: 157 NISRAKAQIETARIDLGYTRITAPFDGQISRRFADPGNVVGPGAVTRLATIVRRDQVHVY 216
            ++  +AQ++ A+++L +TR+T+P  G++SR     GN+V    VT L ++V  D+V+ Y
Sbjct: 154 AVAGIQAQLDLAKLNLSFTRVTSPISGRVSRAEITAGNLV-TADVTALTSVVSTDKVYAY 212

Query: 217 FNINERDLLRLMAERPKPKTASAPTMPLELALADEDGFPHAGKLDYADPGVDPATGTMQL 276
           F+ +ER  L+      + +  +  T P+ + L +E G PH G++++ D  V+PATGT++ 
Sbjct: 213 FDADERVFLKYTELARQGRRGA--TTPVYMGLFNETGNPHQGQMNFVDNQVNPATGTIRG 270

Query: 277 RGLFPNPSGRLLPGLFARIRVAVGQSDKAMMVPDRAIGQDQSGSYVIIVNAQNIAEQRAV 336
           R +F N  G   PGL+AR+++    +  A+++ D A+G D    +V+++     A  R+V
Sbjct: 271 RAVFDNSKGEFTPGLYARLKLVGSGTYSAVLINDEAVGTDLGKKFVLVMEGDKPA-YRSV 329

Query: 337 VLGPLHEGYRVVSKGLSAEDRVVVNGIQRARPGSPVDPTPAP 378
            LGP  EG R+V  GL+ ED +VV G+QR RPGSPV P   P
Sbjct: 330 ELGPKIEGLRIVRSGLNKEDTIVVKGLQRVRPGSPVAPETIP 371