Pairwise Alignments

Query, 389 a.a., efflux transporter, RND family, MFP subunit (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 394 a.a., efflux transporter, RND family, MFP subunit (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  205 bits (521), Expect = 2e-57
 Identities = 134/393 (34%), Positives = 199/393 (50%), Gaps = 5/393 (1%)

Query: 1   MLRRHTISRAVHIALLALATATGIYGCDSRNAYVPPPPPKVTVGAPHVGPVTEYMEFSGT 60
           M  R  + + V   +L +A    + GC        PP P V V     G V    E+   
Sbjct: 1   MALRFFMGQRVLPFVLVVAMMAALTGCKEEAQKGAPPAPLVEVKTITAGDVPVTSEYVAQ 60

Query: 61  IAAVESVDITARVTGTLRSAQFRDGSTVHKGDPLFIIEPEPYQAALQRAEAELEVQQAAL 120
            A    V++ ARVTG L    + +G  + KG  +F I+P+ Y+AAL +AE +L  +QA L
Sbjct: 61  TAGSREVEVRARVTGILLKRTYTEGRPIKKGALMFEIDPDTYKAALDQAEGQLAQEQARL 120

Query: 121 ARAETELARSRKLLTEKAGSETDVVKWQQQRDSAKANISRAKAQIETARIDLGYTRITAP 180
           +RA  E  R   L  + A S+ D      + DSA A +  A+A+++ ARI+LGYTR+ AP
Sbjct: 121 SRARLERDRVLALYADNAVSQKDRDDAVTEFDSASAAVKVAQARVKEARINLGYTRVDAP 180

Query: 181 FDGQISRRFADPGNVVGPGA-VTRLATIVRRDQVHVYFNI--NERDLLRLMAERPKPKTA 237
             G  S+     G++V P A  + L TI R D ++V F +   E   LR + E  K +  
Sbjct: 181 IAGVTSKEVRSEGSLVSPSADGSLLTTITRLDPLYVNFGVPGTEMSSLRRLIESGKAE-M 239

Query: 238 SAPTMPLELALADEDGFPHAGKLDYADPGVDPATGTMQLRGLFPNPSGRLLPGLFARIRV 297
            A  + ++L L D   +   GK+ + D  VD  TGT++ R  FPNP   ++PG F R +V
Sbjct: 240 PADGLAVQLTLPDGTVYARTGKITFTDKQVDQTTGTVRSRAEFPNPEAEVMPGQFVRAKV 299

Query: 298 AVGQSDKAMMVPDRAIGQDQSGSYVIIVNAQNIAEQRAVVLGPLHEGYRVVSKGLSAEDR 357
                  A++VP RA+ + Q G  V +V +  +A  R VV+     G  ++ KGLS  + 
Sbjct: 300 LGLVLKNAIIVPQRAVLETQKGPMVYVVGSDMVANLRPVVVAEALGGDYLIEKGLSGGET 359

Query: 358 VVVNGIQRARPGSPVD-PTPAPDTGQPAGKPAS 389
           ++V GI +ARPG PV    PA      A +P +
Sbjct: 360 IIVEGIIKARPGQPVRVAQPANGAAPAAAQPGA 392