Pairwise Alignments

Query, 389 a.a., efflux transporter, RND family, MFP subunit (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 400 a.a., efflux RND transporter periplasmic adaptor subunit from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  253 bits (646), Expect = 7e-72
 Identities = 145/369 (39%), Positives = 214/369 (57%), Gaps = 8/369 (2%)

Query: 9   RAVHIALLALATATGIYGCDSRNAYVPPPPPKVTVGAPHVGPVTEYMEFSGTIAAVESVD 68
           R + IA +++     +YGC  +        P VTV  P    V ++ EF+G   AVESVD
Sbjct: 2   RGLKIAAVSVMVTGALYGCSPKAEAPAQGAPPVTVAVPLKQQVRDWDEFTGRFEAVESVD 61

Query: 69  ITARVTGTLRSAQFRDGSTVHKGDPLFIIEPEPYQAALQRAEAELEVQQAALARAETELA 128
           + ARV G +++  FRDG  V KG  LF ++P P QAAL +A+A++   Q+ L+ A   LA
Sbjct: 62  VRARVGGYIQAVHFRDGQMVQKGQLLFTLDPRPAQAALAQAQAQVAQAQSQLSLARANLA 121

Query: 129 RSRKLLTEKAGSETDVVKWQQQRDSAKANISRAKAQIETARIDLGYTRITAPFDGQISRR 188
           RS  LL  +A S+ +    +   D+A+AN++   A +  AR++L YTR+TAP  G++S R
Sbjct: 122 RSEALLASQAVSKAEYDSNKAAVDAAQANLAAGNAAVRNARLNLEYTRVTAPTSGRVSDR 181

Query: 189 FADPGNVV--GPGAVTRLATIVRRDQVHVYFNINERDLLRLMAERPKPKTASAPTMPLEL 246
             DPGNV+  G  A   L TI+    +H  F+ +E  LL+ + +    + A      + +
Sbjct: 182 RVDPGNVIAGGSSAGDILTTIISGGPIHFVFDGSEAVLLKYLRQGGANQGA-----VVNV 236

Query: 247 ALADEDGFPHAGKLDYADPGVDPATGTMQLRGLFPNPSGRLLPGLFARIRVAVGQSDKAM 306
            L DE  + H G+LD++D  VD A+G ++LR + PN  G L PG+F   +VA   +  A+
Sbjct: 237 RLQDESTYKHTGRLDFSDNAVDTASGVIRLRAILPNADGFLRPGMFGSAQVAGAGAYDAL 296

Query: 307 MVPDRAIGQDQSGSYVIIVNAQNIAEQRAVVLGPLHEGYRVVSKGLSAEDRVVVNGIQR- 365
           +VPD AIG DQ+   V +VNA      +AV LGP+ +G RVV  GL+  DRV++ G+QR 
Sbjct: 297 LVPDSAIGTDQARRTVAVVNADGTVTNKAVQLGPIVQGLRVVRSGLAPTDRVIIAGLQRA 356

Query: 366 ARPGSPVDP 374
           A+PGS V P
Sbjct: 357 AQPGSKVTP 365