Pairwise Alignments

Query, 77 a.a., DNA-directed RNA polymerase, omega subunit (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 87 a.a., DNA-directed RNA polymerase subunit omega from Pseudomonas simiae WCS417

 Score = 58.2 bits (139), Expect = 2e-14
 Identities = 36/75 (48%), Positives = 46/75 (61%), Gaps = 2/75 (2%)

Query: 1  MARITVEDCQKRIDNRFLLVQMAIKRVQQYRE-GYEPLVDSKN-KEVVTALREIAAGKVM 58
          MAR+TVEDC + +DNRF LV ++ KR +Q    G EPLV  +N K  V ALREIA G + 
Sbjct: 1  MARVTVEDCLEHVDNRFELVMLSTKRARQLATGGKEPLVQWENDKPTVVALREIAEGLMS 60

Query: 59 PEDLALYRPAEGEEM 73
           E +A     E E +
Sbjct: 61 YEFIANAEIVEDEPL 75