Pairwise Alignments

Query, 248 a.a., conserved hypothetical protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 311 a.a., tRNA 2-thiocytidine(32) synthetase TtcA from Pectobacterium carotovorum WPP14

 Score = 88.2 bits (217), Expect = 2e-22
 Identities = 66/228 (28%), Positives = 113/228 (49%), Gaps = 11/228 (4%)

Query: 15  KSAGKTMQHTGMLYPGARIGVAVSGGMDSWVLLQVLRIRQRIVPFPFEIMALHVN---PG 71
           ++ G+ +    M+  G RI V +SGG DS+ +L++LR  Q+  P  F ++A++++   PG
Sbjct: 24  RNVGEAIADFNMIEEGDRIMVCLSGGKDSFTMLEILRNLQQSAPINFSLVAVNLDQKQPG 83

Query: 72  FDPENHAPLLPWLERNGVAAHI-EVTDHG-PRAHSPENRRNSACFYCAWLRRKRLFELCA 129
           F PE+  P   +L+  GV   I E   +G  +   PE +  + C  C+ LRR  L+    
Sbjct: 84  F-PEHVLP--QYLDSIGVEYKIVEENTYGIVKDKIPEGK--TTCSLCSRLRRGILYRTAT 138

Query: 130 QYRLSHLAFGHNADDLVGTFLMNLYQNGRVDGMSMKEAFFGGRLQVIRPLLMVEKSDIAR 189
           +   + +A GH+ DD++ T  +N++  G++ GM  K     G+  VIRPL    + DI R
Sbjct: 139 ELGATKIALGHHRDDILQTMFLNMFYGGKLKGMPPKLMSDDGKHIVIRPLAYCREKDIER 198

Query: 190 AVRQWGLPVW-SNPCPSAGATRRSEVMDDFQRLCRENKGMKRNVFNGL 236
                  P+   N C S    +R  + D  +   +   G    +F+ +
Sbjct: 199 FAEARQYPIIPCNLCGSQPNLQRQVIKDMLRDWDKRYPGRIETMFSAM 246