Pairwise Alignments

Query, 459 a.a., sigma-54 dependent transcriptional regulator/response regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 461 a.a., fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein from Escherichia coli BL21

 Score =  397 bits (1019), Expect = e-115
 Identities = 208/457 (45%), Positives = 293/457 (64%), Gaps = 2/457 (0%)

Query: 1   MSETTHILVIDDEKNYLLVLEALLTDAGYAVTALNDPETALAFLEESEVDVVITDMKMPR 60
           M+    IL++DDE N   +L       G+     N+  TAL    +   DVV+ D++MP 
Sbjct: 1   MTAINRILIVDDEDNVRRMLSTAFALQGFETHCANNGRTALHLFADIHPDVVLMDIRMPE 60

Query: 61  VTGREVLERVKKTWPHIPVCIMTAFGSIEGAVDVMKYGAFDYITKPFSNDELLLSVQNAA 120
           + G + L+ ++      PV +MTA+  +E AV+ ++ GAFDY+ KPF  DEL L VQ A 
Sbjct: 61  MDGIKALKEMRSHETRTPVILMTAYAEVETAVEALRCGAFDYVIKPFDLDELNLIVQRAL 120

Query: 121 ELSRVHRQYRALRANLEERYGTHQIIGRSKAIREVLDMVDRAAPSRSTVLITGESGTGKE 180
           +L  + ++ R L   L   +    I+  S A+ ++     + A S+++VLI+GESGTGKE
Sbjct: 121 QLQSMKKEIRHLHQALSTSWQWGHILTNSPAMMDICKDTAKIALSQASVLISGESGTGKE 180

Query: 181 LVARAIHFSSPRNSGPFVSVNCMALNPGVLESELFGHEKGSFTGAMAMRRGRFEQADGGT 240
           L+ARAIH++S R  GPF+ VNC AL   +LESELFGHEKG+FTGA  +R+G FE+A+ GT
Sbjct: 181 LIARAIHYNSRRAKGPFIKVNCAALPESLLESELFGHEKGAFTGAQTLRQGLFERANEGT 240

Query: 241 LFLDEIGELTPELQVKLLRVLQERRFERVGGGDEIEVDIRVVAATNKDLQKEVENGTFRE 300
           L LDEIGE+   LQ KLLR+LQER FER+GG   I+VDIR++AATN+DLQ  V+ GTFRE
Sbjct: 241 LLLDEIGEMPLVLQAKLLRILQEREFERIGGHQTIKVDIRIIAATNRDLQAMVKEGTFRE 300

Query: 301 DLYYRLNVVHVALPPLRERREDIPLLVGHFVEKLARDNGMKPKTFTPEAHDYLTGYEWPG 360
           DL+YRLNV+H+ LPPLR+RREDI LL  HF++K + +N        P A   LT + WPG
Sbjct: 301 DLFYRLNVIHLILPPLRDRREDISLLANHFLQKFSSENQRDIIDIDPMAMSLLTAWSWPG 360

Query: 361 NIRQLQNVVERCLVLVASDTVGVDDLPPEIRDEESQLKSAVDLLPV-RLDLADTLEKIEA 419
           NIR+L NV+ER +V+ +   +  +DLPP+IR         V   PV   +L + ++++E 
Sbjct: 361 NIRELSNVIERAVVMNSGPIIFSEDLPPQIRQPVCN-AGEVKTAPVGERNLKEEIKRVEK 419

Query: 420 ALIRRALVRAEFVQVKAAELLGISKSLLQYKLKKYGI 456
            +I   L + E  + + A +LGIS+  L YKL++YGI
Sbjct: 420 RIIMEVLEQQEGNRTRTALMLGISRRALMYKLQEYGI 456