Pairwise Alignments

Query, 616 a.a., DNA polymerase III, gamma and tau subunits, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 630 a.a., DNA polymerase III subunits gamma and tau (EC 2.7.7.7) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  284 bits (726), Expect = 9e-81
 Identities = 224/640 (35%), Positives = 311/640 (48%), Gaps = 59/640 (9%)

Query: 1   MSHASLTARYRPQTFAEVAGQETVKAILSRAAQENRVAPAYLFSGTRGVGKTTIARIFAK 60
           MS+  L  +YRP+ F E+ GQ  V   LS A    R+  AYLF+GTRGVGKTT++RI AK
Sbjct: 1   MSYVVLARKYRPRNFTEMVGQGHVVQALSNALTTQRLHHAYLFTGTRGVGKTTVSRILAK 60

Query: 61  ALNCTTAP-----TGEPCNTCEQCRKVTQGMHVDVVEIDGASNRGIDDAKRLKEAIGYAP 115
           +LNC  +      T EPC  C+ C  +  G  VD  E+D ASNRG+D+ + L E   Y P
Sbjct: 61  SLNCLGSDGQGGITAEPCGVCQACTDIDSGRFVDYTELDAASNRGVDEVQALLEQAVYKP 120

Query: 116 MEGRYKVFIIDEAHMLTREAFNALLKTLEEPPARVTFVLATTEPHKFPVTIVSRCQHFTF 175
           ++GR+KVF+IDE HMLT  AFNA+LKTLEEPP  + FVLATT+P K PVT++SRC  F  
Sbjct: 121 VQGRFKVFMIDEVHMLTNTAFNAMLKTLEEPPEYLKFVLATTDPQKVPVTVLSRCLQFNL 180

Query: 176 TRLSEAGLEAHLTKVLGREGVDYDPAAVRLIARRAAGSVRDSMSLLGQVLALGESRLTID 235
             ++   +  HL +VL  E V  D  A+RL++R A GS+RD++SL  Q +A G  +L   
Sbjct: 181 RPMAPETVLEHLQQVLQAEQVTADAQALRLLSRAARGSMRDALSLTDQAIAFGGGQLQEA 240

Query: 236 GARGVLGLAGQELFLRLMEALAAQDCLGVANVVRELLDRGVDMGFFLRELVATWRNLFML 295
             R +LG   +   LRL++ALA  D   V + V  L   G++    L E+    + + +L
Sbjct: 241 AVRQMLGAVDRSYVLRLIDALARGDGATVVDTVDALRVNGLNAASTLEEMTGVLQRMAVL 300

Query: 296 RQAGEAALASLDLPEDEARQWLGWAKRFEPAHIHACWQMTLEGQRRVLTSLEPAMALELL 355
           +   + A A      DEA Q    A+          + + L G+  +  + +   AL ++
Sbjct: 301 QAVPDRAQAEGVNDPDEA-QIARLAQSLPADETQLLYSLCLHGRGELGLAPDEYAALTMV 359

Query: 356 LLNLAMLPRLMPVESLRPSGGGASAPSGSAAEGPASGGAATIPTPGTQGMQGTAPAAGMT 415
           LL L       P  ++ PS   A   +  +AE P +   A  P P         P     
Sbjct: 360 LLRLM---AFKPAGTVSPS-AAAEKKTLKSAETPVAAVVAAAPQPVP---LVRLPVVNPP 412

Query: 416 PSPAAPA-TPAPSAAPSPRV-------PWDDAAPAPRQTGIP----PRPAPRMPEASPT- 462
           P+ AAP  TP P A P  +        P DD AP P   G P      PAP+   A P  
Sbjct: 413 PAVAAPVPTPLPMAEPVAKAAPQMLAEPMDDDAPWPEDDGPPWEEAAEPAPQRVVAIPVR 472

Query: 463 -AGSPAAPAQGDDSDTAEHTPSGPRTWDGFLEFCQGRNGQGG-RLATVLRQTTPEHDDGI 520
            AG P    Q    +  EH   G +T    L    G + +G     TV++    E    +
Sbjct: 473 EAGEPGPLDQPRPRE--EH---GAQT---VLPAAPGGSVEGDFWFETVMQLVRAETITAL 524

Query: 521 LRLATMSSVQYERLTD----AATRTTL-AGLVRDYFGDACR---------VEV----NPP 562
           +R   + S    R TD       R++L  G +R+    A +         VE+    + P
Sbjct: 525 VRELGLQSQLIARDTDQWMLRVERSSLNQGNIRERLAAALQTLGHEVRLTVEIGSVADSP 584

Query: 563 TRVRRTEAELR-KEAEAH----PAVQLLKEEMGACILKCT 597
            R    EAE R +EAEAH    P VQ +  + G  I+  T
Sbjct: 585 ARRVAAEAERRQREAEAHILNDPFVQTMMRDFGGRIVPGT 624