Pairwise Alignments

Query, 616 a.a., DNA polymerase III, gamma and tau subunits, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 642 a.a., DNA polymerase III subunits gamma and tau (EC 2.7.7.7) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  280 bits (717), Expect = 1e-79
 Identities = 173/473 (36%), Positives = 251/473 (53%), Gaps = 37/473 (7%)

Query: 1   MSHASLTARYRPQTFAEVAGQETVKAILSRAAQENRVAPAYLFSGTRGVGKTTIARIFAK 60
           MS+  L  ++RPQTFA+V GQE V   L+      R+  AYLFSGTRGVGKT+IAR+ AK
Sbjct: 1   MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60

Query: 61  ALNCTTAPTGEPCNTCEQCRKVTQGMHVDVVEIDGASNRGIDDAKRLKEAIGYAPMEGRY 120
            LNC T  T  PC  C+ CR++ QG  VD++EID AS   ++D + L + + YAP  GR+
Sbjct: 61  GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120

Query: 121 KVFIIDEAHMLTREAFNALLKTLEEPPARVTFVLATTEPHKFPVTIVSRCQHFTFTRLSE 180
           KV++IDE HML+R +FNALLKTLEEPPA V F+LATT+P K PVTI+SRC  F    L  
Sbjct: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPAHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180

Query: 181 AGLEAHLTKVLGREGVDYDPAAVRLIARRAAGSVRDSMSLLGQVLALGESRLTIDGARGV 240
             +   L  +L  E + ++P A++L++R A GS+RD++SL  Q +A G+ +++      +
Sbjct: 181 EQIRHQLEHILNEEHIAHEPRALQLLSRAADGSLRDALSLTDQAIASGDGQVSTQAVSAM 240

Query: 241 LGLAGQELFLRLMEALAAQDCLGVANVVRELLDRGVDMGFFLRELVATWRNLFMLRQAGE 300
           LG    +  L L+EA+   +   V +++ E   RG++    L E+++    + M+ Q   
Sbjct: 241 LGTLDDDQALSLVEAVVDANGERVMSLINEAAARGIEWEALLVEMLSLLHRIAMV-QLSP 299

Query: 301 AALASLDLPEDEARQWLGWAKRFEPAHIHACWQMTLEGQRRVLTSLEPAMALELLLLN-L 359
           AAL S D+   E R     A+   P  +   +Q  L G++ +  + +  M +E+ LL  L
Sbjct: 300 AALGS-DMAAIEQRM-RELARTVPPGDLQLYYQTLLIGRKELPWAPDRRMGVEMTLLRAL 357

Query: 360 AMLPRLMPVESLRPSGGGASAPSGSAAEGPASGGAATIPTPGT--QGMQGTAPAAGMTPS 417
           A  PR+                               +P P T  Q     AP A MTP 
Sbjct: 358 AFHPRM------------------------------PLPEPETPRQSFAPVAPTAVMTPP 387

Query: 418 P-AAPATPAPSAAPSPRVPWDDAAPAPRQTGIPPRPAPRMPEASPTAGSPAAP 469
               P+ PAP  +P+P         A R      +   +  ++ P A S A P
Sbjct: 388 QLQQPSAPAPQTSPAPLPASTSQVLAARNQLQRAQGVTKTKKSEPAAASRARP 440