Pairwise Alignments

Query, 616 a.a., DNA polymerase III, gamma and tau subunits, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 752 a.a., DNA polymerase III, subunit gamma and tau from Kangiella aquimarina DSM 16071

 Score =  280 bits (716), Expect = 2e-79
 Identities = 186/582 (31%), Positives = 282/582 (48%), Gaps = 35/582 (6%)

Query: 1   MSHASLTARYRPQTFAEVAGQETVKAILSRAAQENRVAPAYLFSGTRGVGKTTIARIFAK 60
           MS+  L  ++RP+ F E+ GQE V   L  A +  R+  AYLF+GTRGVGKTTIARI +K
Sbjct: 1   MSYQVLARKWRPKNFDELQGQEHVSRALVNAIESGRLHHAYLFTGTRGVGKTTIARILSK 60

Query: 61  ALNC-TTAPTGEPCNTCEQCRKVTQGMHVDVVEIDGASNRGIDDAKRLKEAIGYAPMEGR 119
            LNC T   T +PC  C  C ++ +G  VD++E+D AS   +DD + L E + Y P  GR
Sbjct: 61  CLNCETNGLTSKPCGECASCVEIDEGRFVDLIEVDAASRTKVDDTRELLENVQYKPTRGR 120

Query: 120 YKVFIIDEAHMLTREAFNALLKTLEEPPARVTFVLATTEPHKFPVTIVSRCQHFTFTRLS 179
           YKV++IDE HML+  +FNALLKTLEEPP  V F+LATT+P K PVT++SRC  F    + 
Sbjct: 121 YKVYLIDEVHMLSNSSFNALLKTLEEPPEHVIFLLATTDPQKLPVTVLSRCLQFHLKHME 180

Query: 180 EAGLEAHLTKVLGREGVDYDPAAVRLIARRAAGSVRDSMSLLGQVLALGESRLTIDGARG 239
           E  +  HL  +L +E +D++  A+ LI+R A GS+RD++SLL Q +A G+ ++  +  R 
Sbjct: 181 EQTIAQHLAYILQQESIDFEAPALELISRSAEGSMRDALSLLDQAIAFGQGKVQEEDIRT 240

Query: 240 VLGLAGQELFLRLMEALAAQDCLGVANVVRELLDRGVDMGFFLRELVATWRNLFMLRQAG 299
           +LG    +  ++L+EALA  D       V E+    VD    L+EL++    + + +  G
Sbjct: 241 MLGTIDHQFMVKLLEALANHDSAAAIEAVAEMSHYPVDFADALKELLSRIHQIAIFQSTG 300

Query: 300 EAALASLDLPEDEARQWLGWAKRFEPAHIHACWQMTLEGQRRVLTSLEPAMALELLLLNL 359
                 LD       ++ G   R     +   +QM L  +R +  +  P   LE+ LL +
Sbjct: 301 ----VLLDQAAPYVEEFAG---RIASDDLQLYYQMGLHARRDLEWAPSPRQGLEMALLRM 353

Query: 360 AMLPRLMPVESLRPSGGGASAPSGSAAEGPASGGAATIPTPGTQGMQGTAPAAGMTPSPA 419
               RL P + ++ S    S  S +  +                 ++   P A  TP+ +
Sbjct: 354 LAF-RLEPSQVIQNSSNQTSLDSEAKKKA---------------SLKPAEPVAQKTPAQS 397

Query: 420 APATPAP-SAAPSPRVPWDDAAPAPRQTGIPPRPAPRMPEASPTAGSPAAPAQGDDSDTA 478
             A  AP    P+P+         P Q   P       PE +        PAQ   +D  
Sbjct: 398 EAAENAPGEKEPAPKA-------EPEQKTKPEHKTEHKPEPAAAVSRENEPAQA-IADGP 449

Query: 479 EHTPSGPRTWDGFLEFCQGRNGQGGRLATVL-RQTTPEHDDGILRLATMSSVQYERLTDA 537
           E  P  P  +  F +  +       +  +V   Q + E      + ++  +       D 
Sbjct: 450 EEPPFNPDDYASFSDDEKNEESIAEQYQSVASAQASEEAKQPSAKSSSEQTADTSSGHDQ 509

Query: 538 ATRTTLAGLVRDYFGDACRV-EVNPPTRVRRTEAELRKEAEA 578
           A   +L   +   F D   V +VN     + T+A+  K+ +A
Sbjct: 510 AALASLHSALGLSFSDEPEVAQVNESKVEQATQADTPKQTQA 551