Pairwise Alignments

Query, 402 a.a., rubredoxin-oxygen oxidoreductase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 285 a.a., hypothetical protein from Magnetospirillum magneticum AMB-1

 Score = 52.0 bits (123), Expect = 2e-11
 Identities = 56/265 (21%), Positives = 105/265 (39%), Gaps = 39/265 (14%)

Query: 3   PIEIKKDIFWVGVVDHNSRDFHGYSLSPQGTTYNAYVVKD-EKTVLFDT-VKHDFTDTML 60
           P+++   +FWVG  D   R              N Y++ D ++ +L D   + DF+  M 
Sbjct: 13  PVKLADGVFWVGFADLEGR-----------LQCNPYLIVDGDEAILIDGGSRPDFSTVMR 61

Query: 61  CRLSRVVEPCKIDYIVCNHLEPDHAGALPELIARCKPEKI-FCSPMGLKAMEAHFDTTGW 119
             L   V P +I +++  H +PD  G++P L +     ++   S         H+     
Sbjct: 62  KVLQTGVSPRQISHLIYQHYDPDLCGSIPNLESLIDSAELKIISHADNNPFIRHYSVNSP 121

Query: 120 PVEVVKTGDSISI-GKRTIHFVETRMLHWPDSMVSYIPEDKLLICNDAFGQNIA-STERY 177
            + + +    +++   RT+ F  T   H   S ++Y     +L  +D FG   A S  R 
Sbjct: 122 LLCIDRLERKLTMRSGRTLRFFRTPYAHSAGSFITYDETSGILFTSDLFGSAGAFSNWRL 181

Query: 178 ADEIDRSAL----FHAMK-----------------EYYHNIVLPFSPIVLKTLAQIEQLG 216
             + D+  L     H  +                  ++H  V+P +  +   +  ++ +G
Sbjct: 182 FADFDKKCLGCEVAHPERPDEHCKETASPCPWSGMHHFHRKVMPGNRQLRHAMKVVKAIG 241

Query: 217 LDIDMLAPDHGLIFRGYDDVKYALD 241
               M AP HG I    +D+  A++
Sbjct: 242 --ATMAAPQHGSILYRVEDIAAAIE 264