Pairwise Alignments

Query, 833 a.a., GGDEF domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 460 a.a., diguanylate cyclase, cold- and stationary phase-induced oxygen-dependent biofilm regulator from Escherichia coli BL21

 Score =  100 bits (250), Expect = 1e-25
 Identities = 65/181 (35%), Positives = 95/181 (52%), Gaps = 10/181 (5%)

Query: 658 VGRDLSTIRRLEDKI-RQQAMNDGLTGLFNHSHFHLILEREMERSRRTGRGLGLIFFDLD 716
           V + ++ +R L +++ R +   D LT L N      I +RE+  + RTG  L ++  D+D
Sbjct: 276 VSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVD 335

Query: 717 RFKRINDTYGHQAGDTILRRVAAALASVTRKGMDFPCRYGGDEFAVVTTEIEAEALQRLA 776
           +FK INDT+GH  GD ILR+V+ A     R   D+  RYGGDEF +V TE       R A
Sbjct: 336 KFKEINDTWGHNTGDEILRKVSQAFYDNVRSS-DYVFRYGGDEFIIVLTEASENETLRTA 394

Query: 777 MRIRNTVVESCRN-------AIDLSMGLAMLKPEDTIESFVARTDRASYRAKNQPGGDRL 829
            RIR+ V ++          A+ LS+G AM       E  +   D A Y AK + G +R+
Sbjct: 395 ERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRR-GRNRV 453

Query: 830 Q 830
           +
Sbjct: 454 E 454