Pairwise Alignments

Query, 277 a.a., ABC transporter, permease protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 272 a.a., carbohydrate ABC transporter permease from Serratia liquefaciens MT49

 Score =  163 bits (413), Expect = 3e-45
 Identities = 84/256 (32%), Positives = 147/256 (57%), Gaps = 4/256 (1%)

Query: 25  AIMWALPLLYAIWTAFHPSAYSTRFTLN---APLTLENFVTAWHAAPFALYFVNTVLLVT 81
           A+   +P ++ + T+    A S +  L    A  +L+ +       PFA +++N++L   
Sbjct: 17  ALASVVPFIWMLVTSLKTQAESIQIPLTLLPAHPSLQAYGKIMREIPFADFYLNSLLATF 76

Query: 82  MVLAAQLVLCTLAAYAFAKYDFRGKNIMFALVLMQLMIMPDVLVVENYRTMASIGVLDST 141
             +  Q+V+ T+AAY F++  FRG++ +F + +  LM+     ++  +  +  +G+++S 
Sbjct: 77  FTVTLQMVIATMAAYGFSRLHFRGRDAVFLVCISILMVPGQAFLIPQFLVVQKLGLVNSI 136

Query: 142 LAIGLPYMASAFGIFLLRQTFKSIPKELDEAAAVEGASTLQILWKVYVPLGKPVYLAYAL 201
             + LP + S +  FLLRQ F ++PKE++EAA ++G S   I W++ +PL +P  +A  +
Sbjct: 137 TGLVLPGIFSIYATFLLRQFFLAVPKEMEEAALIDGYSYFAIFWRIMLPLIRPGIIACII 196

Query: 202 VSISYHWNNFLWPLIVTNTTNSRPLTVGLQVFSSTEQGVDWAIITAATLMTSGPLLVAFL 261
           ++  + WNN +WPLIV  TT    L VGL   SS   GV++ ++ A  LM   P+L+ F+
Sbjct: 197 INGLWSWNNLMWPLIVNTTTEKLTLPVGLASLSS-RAGVEYPLLMAGALMAVIPMLMLFI 255

Query: 262 LFQRQFVQSFMRAGIK 277
           LFQR F+Q    AG+K
Sbjct: 256 LFQRYFIQGIASAGVK 271