Pairwise Alignments

Query, 963 a.a., methyl-accepting chemotaxis protein DcrH (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 638 a.a., putative methyl-accepting chemotaxis protein from Pseudomonas putida KT2440

 Score =  175 bits (443), Expect = 1e-47
 Identities = 133/400 (33%), Positives = 197/400 (49%), Gaps = 51/400 (12%)

Query: 404 LLAASKITAARQ-------GAEARTLWGTLLVLALGTLLGSGIAIALVGALSRPLQRLQV 456
           LL AS++  A Q        A+A+TL     VLAL   LG   A A+   +  PL++   
Sbjct: 263 LLQASQMMTASQTEVRDAAAAQAKTLLTVATVLALA--LGLLAAWAITRQIIIPLRQTLR 320

Query: 457 YAGDVAAGNLDARPEGQYPAELDAMRHSIESMVQNLRMRIHEADAKGMEAADSAQAAQAA 516
            A  VA+G+L    + Q   EL  ++ S+  M Q LR                       
Sbjct: 321 AAERVASGDLTQSLQVQRRDELGQLQASMHRMTQGLR----------------------- 357

Query: 517 LDKARASETRIKGLMERMTGAAGKARSVSEHVSRSINDLTAQVHTITQGVETQRHRMDDT 576
                     I G+ + +T  A  A            +L+A     + GV  Q+   D  
Sbjct: 358 --------ELIGGIGDGVTQIASAAE-----------ELSAVTEQTSAGVNNQKVETDQV 398

Query: 577 AQAMDTMRTMVSDVADNARRAAEQADLSRGHAQQGASGVGEAVASIGQVRERIERLNTAM 636
           A AM+ M   V +VA NA +A+E A ++   A++G   VGEAVA I ++   +   + AM
Sbjct: 399 ATAMNQMTATVHEVARNAEQASEAALMADQQAREGDRVVGEAVAQIERLASEVVNSSEAM 458

Query: 637 ARLGEEADSIGKVMSVISDIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTM 696
             L  E+D IG V+ VI  +A QTNLLALNAAIEAARAG+AGRGFAVVADEVR LA++T 
Sbjct: 459 NLLKTESDKIGSVLDVIKSVAQQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLAQRTQ 518

Query: 697 QATGEVGSAVTRIQTHTRDNIAAVETAMREATASADAATASGRVMDDIVSRVDETAGMVQ 756
           Q+T E+   +  +Q+ T+   + ++ + +   +S +    +G  ++ I   V     M Q
Sbjct: 519 QSTEEIEELIAGLQSGTQRVASVMDNSRQLTDSSVELTRRAGSSLETITRTVSSIQAMNQ 578

Query: 757 SIAAASDQQAAAATMVGRNVEEVNAIAGDTAASMSHFAGT 796
            IA A+++Q A A  + R+V  V  I+  T+A+    A +
Sbjct: 579 QIATAAEEQTAVAEEINRSVMNVRDISDQTSAASEETASS 618



 Score = 38.5 bits (88), Expect = 1e-06
 Identities = 45/222 (20%), Positives = 92/222 (41%), Gaps = 45/222 (20%)

Query: 469 RPEGQYPAELDAMRHSIESMVQNLRMRIHEADA--------KGMEAADSAQAAQAALDKA 520
           R  G+  A+++ +   + +  + + +   E+D         K +    +  A  AA++ A
Sbjct: 435 RVVGEAVAQIERLASEVVNSSEAMNLLKTESDKIGSVLDVIKSVAQQTNLLALNAAIEAA 494

Query: 521 RASETRIKGLMERMTGAAGKARSVSEHVSRSINDLTAQVHTITQGVETQRHRMDDTAQAM 580
           RA E             A + RS+++   +S    T ++  +  G+++   R+   A  M
Sbjct: 495 RAGEAG-----RGFAVVADEVRSLAQRTQQS----TEEIEELIAGLQSGTQRV---ASVM 542

Query: 581 DTMRTMVSDVADNARRAAEQADLSRGHAQQGASGVGEAVASIGQVRERIERLNTAMARLG 640
           D  R +     +  RRA                  G ++ +I +    I+ +N  +A   
Sbjct: 543 DNSRQLTDSSVELTRRA------------------GSSLETITRTVSSIQAMNQQIATAA 584

Query: 641 EE----ADSIGKVMSVISDIADQTNLLA---LNAAIEAARAG 675
           EE    A+ I + +  + DI+DQT+  +    ++++E AR G
Sbjct: 585 EEQTAVAEEINRSVMNVRDISDQTSAASEETASSSVELARLG 626