Pairwise Alignments

Query, 963 a.a., methyl-accepting chemotaxis protein DcrH (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 807 a.a., HAMP domain-containing protein from Magnetospirillum magneticum AMB-1

 Score =  187 bits (474), Expect = 3e-51
 Identities = 154/567 (27%), Positives = 252/567 (44%), Gaps = 43/567 (7%)

Query: 401 DEALLAASKITAARQGAEARTLW-GTLLVLALGTLLGSGIAIALVGALSRPLQRLQVYAG 459
           D+A+      T A         W G ++ L L  LL   IA ++V     PL  +     
Sbjct: 277 DQAMDQQKADTEAGMARSNTATWTGAIIALGLAVLLSWLIARSIV----TPLSAMTGAMT 332

Query: 460 DVAAGNLDAR-PEGQYPAELDAMRHSIESMVQN-LRMRIHEADAKGMEAADSAQAAQAAL 517
           +++ GN     P  +   E+ AM  ++E   +N L+M   +A+ +  +    A    A  
Sbjct: 333 ELSKGNKTVDIPARERTDEIGAMAQAMEIFKENTLKMDKMQAEQEAQKVKAEADRKAALH 392

Query: 518 DKARASETRIKGLMERMTGAAGKARSVSEHVSRSINDLTAQVHTITQGVETQRHRMDDTA 577
             A   E  +  +++ +T AA + +  S  ++ + ++ +AQ  T+          ++  A
Sbjct: 393 HMADTFEESVGKVVQTVTSAATELQGASSQMAGTAHETSAQATTVASAATQASANVETVA 452

Query: 578 QAMDTMRTMVSDVADNARRAAEQADLSRGHAQQGASGVGEAVASIGQVRERIERLNTAMA 637
            A + +   +S++A    R+   A+     A+Q      EA  +  QVR           
Sbjct: 453 AATEELAASISEIAKQVERSQAVAN----RAEQ------EAENTTNQVRA---------- 492

Query: 638 RLGEEADSIGKVMSVISDIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTMQ 697
            L +    IG+V+ +I+DIA QTNLLALNA IEAARAGDAG+GFAVVA+EV+ LA +T +
Sbjct: 493 -LSDNVGRIGEVVVLINDIAAQTNLLALNATIEAARAGDAGKGFAVVANEVKNLANQTAK 551

Query: 698 ATGEVGSAVTRIQTHTRDNIAAVETAMREATASADAATASGRVMDDIVSRVDETAGMVQS 757
           AT E+ S +  +Q  T + + A++T  +         +  G +   + S V E       
Sbjct: 552 ATDEIASQIKAVQEGTGNAVKAIDTISK-------VISEMGEISASVASAVQEQTAATGE 604

Query: 758 IAAASDQQAAAATMVGRNVEEVNAIAGDTAASMSHFAGTLEDIFSQVQELFSMIEVISTG 817
           IA   +Q AA    V  N+  V   A +T  +    + +  D+  Q + L   +     G
Sbjct: 605 IARNVEQAAAGTAEVSSNINSVEQAARETGHAAEQISESATDLSKQAEFLRGEV-----G 659

Query: 818 EEGVSVLADTGDADVLVKWSEDL-ANLPSIDTQHKRLVDYINDLYRAARRRDMDKA-REV 875
                V AD  D  +L +W   L     SID  H+ + D +N  Y      + D A + +
Sbjct: 660 RFLHQVRADKADMRIL-EWENALNTGESSIDRHHREMFDQVNRFYGEMMSGNGDAAIQGI 718

Query: 876 FDALKNYAVEHFGYEERLFADYAYPEATRHKEIHRRFVETVLKWEKQLAAGDPEVVMTTL 935
              +    V HF  EE L   +AYP    H+  HR F++     ++ +  G         
Sbjct: 719 LGLVPAAFVPHFKEEEELMTRHAYPGIDEHRRRHREFMDKFEGLKRAVETGKDGANGQLF 778

Query: 936 RGLVDWLVNHIMKEDKKYEAYLRERGV 962
           + +  WL +HI  ED K  A+LR++ +
Sbjct: 779 QFVAGWLKDHIRHEDGKIAAFLRDKKI 805