Pairwise Alignments

Query, 567 a.a., sigma-54 dependent transcriptional regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 465 a.a., Fis family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  244 bits (622), Expect = 7e-69
 Identities = 133/303 (43%), Positives = 181/303 (59%), Gaps = 4/303 (1%)

Query: 144 FAGMVGASSAMHRTFRLLERAAESDAPVLLLGASGTGKELAARAVHELGRRRNGPYVQLN 203
           F  +VG S A  +  + ++   +S A +LL G SGTGKE+ ARA+H+ G R + P+V +N
Sbjct: 140 FDSLVGDSPAFRKVLQAVDSVRDSSATILLTGESGTGKEMVARAIHKHGSRADKPFVAVN 199

Query: 204 CAALNENLLESELFGHVRGAFTGAVRDRQGRFEAAHGGDLFLDEIGDLPLPTQVKLLRVL 263
           CAA+ E LLESE+FGH +GAFTGAV DR GRF+ A  G LFLDE+GD+PL  Q K+LR L
Sbjct: 200 CAAIPEGLLESEMFGHRKGAFTGAVADRVGRFQQADKGTLFLDEVGDMPLALQAKILRAL 259

Query: 264 ETKRIERVGDNHPREVDVRIIAATNRNLGALVRAGRFREDLLFRINVIPVTLPALAARRE 323
           + + IE VGD   R+VDVR+IAATN+NL   V    FREDL +R+NV P+ LP+L  R E
Sbjct: 260 QERVIEPVGDPRERKVDVRVIAATNKNLLDAVANKEFREDLYYRLNVFPIPLPSLRERVE 319

Query: 324 DIPLLAAFFLRAITERDGRKAGGLTPAALRHLVAYTWPGNVRELRSAMEYACVVAGGGDI 383
           DI  LA  F + ++   G++  G +  AL+ + AY WPGN+REL++ +E A +VA    I
Sbjct: 320 DIAPLARHFAQTLSATAGKRITGFSAEALQAMAAYHWPGNIRELQNCVERATIVAASPVI 379

Query: 384 DAEHLPPHIIDGTPECGGHALAATVAERTGPDAAQEAPADEVRPDAPVRVAGPGAGGGTQ 443
           +   LP ++    P  G      T     GP   Q+  A     +    +A      G Q
Sbjct: 380 EDIDLPGYLFASKPNQGD----VTAILSDGPGIPQDLDAALAEVEKAYILAALQESNGVQ 435

Query: 444 GRA 446
             A
Sbjct: 436 AAA 438