Pairwise Alignments

Query, 567 a.a., sigma-54 dependent transcriptional regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 458 a.a., sigma-54 dependent transcriptional regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  266 bits (680), Expect = 1e-75
 Identities = 176/421 (41%), Positives = 232/421 (55%), Gaps = 25/421 (5%)

Query: 12  IIDTLNEGLVFVGPDGRIRMVNPALERLTGFTRDELVGRACSVL----QCD-ACVRQRKD 66
           I++++ +G+  V  D RI   N A   +TG   +E +GR C  +     CD ACV +   
Sbjct: 12  IMESVADGVFTVDLDWRITSFNRAAAAITGVPAEEALGRRCRDVFHSSVCDGACVLRA-- 69

Query: 67  GGAHWCRLFDRKGENRKRCTVRRKDGTVVPVLKNARVLTDGQGGVQGAVEIITDLSELVD 126
                C   D    +R    VR  DGT VPV  +A  L D +G + G VE   DL+ L  
Sbjct: 70  -----CMEQDTPFGSRTVFMVRT-DGTRVPVSISAAPLKDRRGRLIGGVETFRDLTALHL 123

Query: 127 KERRIEELSRLLGSEEGFAGMVGASSAMHRTFRLLERAAESDAPVLLLGASGTGKELAAR 186
             R +E        +     +V  S AM R   LL + A SDAPVL+LG SGTGKEL AR
Sbjct: 124 MRRELE-------GQRTVEDIVTRSHAMTRLLDLLPQIAASDAPVLILGESGTGKELFAR 176

Query: 187 AVHELGRRRNGPYVQLNCAALNENLLESELFGHVRGAFTGAVRDRQGRFEAAHGGDLFLD 246
           A+H L  R   P+V +NC AL ENLLESELFG+  GAFT A RD+ GRF  A  G +FLD
Sbjct: 177 ALHNLSPRAAKPFVGVNCGALPENLLESELFGYKAGAFTDARRDKPGRFHTAGDGTIFLD 236

Query: 247 EIGDLPLPTQVKLLRVLETKRIERVGDNHPREVDVRIIAATNRNLGALVRAGRFREDLLF 306
           EIGD+PLP QVKLLRVL+ K  E +G  +      R+IAATNR+L  +   G FR DL +
Sbjct: 237 EIGDMPLPLQVKLLRVLQEKCFEPLGAVNAEPALARVIAATNRDLERMTAEGTFRTDLYY 296

Query: 307 RINVIPVTLPALAARREDIPLLAAFFLRAITERDGRKAGGLTPAALRHLVAYTWPGNVRE 366
           R+NV+ + LP L  R ED+P L    +R      G+   G++   L  ++ Y +PGNVRE
Sbjct: 297 RLNVVLLRLPPLRERPEDVPALIDHCVRRRNLLTGKDIEGVSEDVLHLMLRYPFPGNVRE 356

Query: 367 LRSAMEYACVVAGGGDIDAEHLPPHIIDGTPECGGHALAATVAERTGPDAAQEAPADEVR 426
           L + +EYA ++ G G I  EHLP +++      GG A  +    R  P  A E P D+ +
Sbjct: 357 LDNIIEYAFILCGHGFIQLEHLPEYLL----HAGGIATPSLAPSRPQPRPAGE-PGDDGQ 411

Query: 427 P 427
           P
Sbjct: 412 P 412