Pairwise Alignments

Query, 375 a.a., carbamoyl-phosphate synthase, small subunit (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 384 a.a., glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit from Paraburkholderia sabiae LMG 24235

 Score =  354 bits (908), Expect = e-102
 Identities = 187/374 (50%), Positives = 239/374 (63%), Gaps = 5/374 (1%)

Query: 3   ALLALEDGFVLEGRSFTGPGETGGEAIFNTGMTGYQEVLTDPSYAGQMVCMTYPLVGNYG 62
           ALLAL DG V  G S   PG T GE +FNT +TGYQE+LTDPSYA Q+V +TYP +GN G
Sbjct: 8   ALLALADGTVFRGYSIGAPGHTIGEVVFNTAITGYQEILTDPSYARQIVTLTYPHIGNVG 67

Query: 63  VTREDMESGKVHVEAFIVKECCKVPSNWRSEISLPDYLKRHGVMGIEGIDTRALTRHLRI 122
           V  ED+E+ KVH    I+++   + SN+R E SLPDYLK  GV+ I GIDTR LTR LR 
Sbjct: 68  VNAEDVEATKVHAAGLIIRDLPILASNFRMERSLPDYLKAEGVVAIAGIDTRKLTRVLRD 127

Query: 123 HGAMRGVISTQETDPARLVERARALPSMEGQNLVTRVAPAAPYRWDGERPQAVTLEPGGC 182
            GA  G I     D A+ +E AR+ P + G +L   V+   PY W   +     L  G  
Sbjct: 128 KGAQNGAILAGSDDEAKAIELARSFPGLAGMDLAKVVSTQKPYEW---KQTEWRLGSGYG 184

Query: 183 AWVGKGPRLVVYDFGIKWNILRLLAQQGFDMLVVPPSFKAADVAAVGAQAVFLSNGPGDP 242
                  R+V +D+G+K+NILR+LA++G  + V+P    AAD  A+    VFLSNGPGDP
Sbjct: 185 MQNTPRYRVVAFDYGVKYNILRMLAERGCHVTVLPAQSTAADALALNPDGVFLSNGPGDP 244

Query: 243 ATLKDEIAEIAK-LAQTYPTAGICLGHQLLGHALGGRTMKLKFGHHGCNHPVKDLTTGRI 301
                 IA   + + +  PT GICLGHQ++G A+G +TMK+K GHHG NHPVKDL  GR+
Sbjct: 245 EPCDYAIAATKEFIERGIPTFGICLGHQIMGLAVGAKTMKMKTGHHGANHPVKDLEDGRV 304

Query: 302 EISSQNHGFCVDIDSL-TDVEITHVNLNDGTLEGFAHKTKPVIAVQHHPEASPGPNDSRY 360
            I+SQNHGF VD D+L  + ++THV+L DGTL+GFA   KP    Q HPEASPGP+D  Y
Sbjct: 305 VITSQNHGFAVDADTLPANAKVTHVSLFDGTLQGFALTDKPAFCFQGHPEASPGPHDIAY 364

Query: 361 FFARFRNMVREAAG 374
            F RF  ++ +A G
Sbjct: 365 LFDRFTALMDQAKG 378