Pairwise Alignments

Query, 375 a.a., carbamoyl-phosphate synthase, small subunit (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 401 a.a., carbamoyl-phosphate synthase small subunit from Magnetospirillum magneticum AMB-1

 Score =  298 bits (763), Expect = 2e-85
 Identities = 171/375 (45%), Positives = 218/375 (58%), Gaps = 13/375 (3%)

Query: 5   LALEDGFVLEGRSFTGPGETGGEAIFNTGMTGYQEVLTDPSYAGQMVCMTYPLVGNYGVT 64
           L L DG VL G+     G   GE +F TGMTGYQE LTDPS+AGQ++  T+P VGN G  
Sbjct: 30  LVLADGSVLWGKGIGATGSNVGEVVFTTGMTGYQETLTDPSFAGQVITFTFPHVGNVGTN 89

Query: 65  REDMESGKVHVEAFIVKECCKVPSNWRSEISLPDYLKRHGVMGIEGIDTRALTRHLRIHG 124
            ED+E+        I++     P+NWRS   L  +LK + ++G+ G+DTRALTR +R  G
Sbjct: 90  VEDLETTTPAARGLILRADITDPANWRSAKHLDSWLKANNIVGLCGVDTRALTRRIRAKG 149

Query: 125 AMRGVISTQET---DPARLVERARALPSMEGQNLVTRVAPAAPYRWDGERPQAVTLEPGG 181
           A  GVI        D   L  +A   P +EG +L   V  A  Y WD    +      GG
Sbjct: 150 APNGVIVNAPDGAFDLPALWGKAAGWPGLEGMDLARDVTCAQTYSWD----ETEWSLRGG 205

Query: 182 CAWVGKGPR--LVVYDFGIKWNILRLLAQQGFDMLVVPPSFKAADVAAVGAQAVFLSNGP 239
                K PR  +V  DFG K NILR LA+ G  + V+P    A  V A+    VFLSNGP
Sbjct: 206 YGRQAK-PRFHVVAVDFGAKRNILRCLAETGCKVTVLPAEATAEQVLALEPDGVFLSNGP 264

Query: 240 GDPATLKDEIAEIAK--LAQTYPTAGICLGHQLLGHALGGRTMKLKFGHHGCNHPVKDLT 297
           GDPA        + +  +    P  GICLGHQ+LG ALG +T K+  GH G NHPVKDL 
Sbjct: 265 GDPAATGTYAVPMIQGVIKSGKPLFGICLGHQMLGLALGAKTFKMDTGHRGANHPVKDLE 324

Query: 298 TGRIEISSQNHGFCVDIDSL-TDVEITHVNLNDGTLEGFAHKTKPVIAVQHHPEASPGPN 356
           TG++EI+SQNHGF VD  SL   V++TH +L DG++EG A   KPV +VQ+HPEASPGP 
Sbjct: 325 TGKVEITSQNHGFVVDEKSLPAGVKVTHRSLFDGSVEGIAVDGKPVFSVQYHPEASPGPQ 384

Query: 357 DSRYFFARFRNMVRE 371
           D+ Y F RF  ++ +
Sbjct: 385 DAHYLFERFVGLMEK 399