Pairwise Alignments

Query, 375 a.a., carbamoyl-phosphate synthase, small subunit (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 401 a.a., carbamoylphosphate synthase small chain from Agrobacterium fabrum C58

 Score =  286 bits (731), Expect = 9e-82
 Identities = 168/382 (43%), Positives = 211/382 (55%), Gaps = 11/382 (2%)

Query: 3   ALLALEDGFVLEGRSFTGPGETGGEAIFNTGMTGYQEVLTDPSYAGQMVCMTYPLVGNYG 62
           A+L L DG V+EG      G+   E  FNT +TGY+E+LTDPSY GQ+V  T+P +GN G
Sbjct: 14  AMLVLADGTVIEGTGIGATGKVQAEVCFNTALTGYEEILTDPSYLGQIVTFTFPHIGNVG 73

Query: 63  VTREDME----SGKVHVEAFIVKECCKVPSNWRSEISLPDYLKRHGVMGIEGIDTRALTR 118
              ED+E    + +      I K     PSN+R+   L  +LK  GV+G+ GIDTRALT 
Sbjct: 74  TNEEDIEDLTPAARRGAVGVIFKADITDPSNFRAVKHLDAWLKARGVIGLCGIDTRALTA 133

Query: 119 HLRIHGAMRGVISTQET---DPARLVERARALPSMEGQNLVTRVAPAAPYRWDGERPQAV 175
            +R +GA   VI+       D   L   A+A   + G +L           W  E P   
Sbjct: 134 WIRENGAPNAVIAHDPNGVFDIEALKAEAKAWSGLVGLDLAIEATSGQSSTWT-ETPWVW 192

Query: 176 TLEPGGCAWVGKGPRLVVYDFGIKWNILRLLAQQGFDMLVVPPSFKAADVAAVGAQAVFL 235
               G          +V  DFG+K NILRL A     + VVP    A D+ A+    VFL
Sbjct: 193 NKGYGTLGEADAKYHVVCVDFGVKRNILRLFAGLDCKVTVVPAQTSAEDILALKPDGVFL 252

Query: 236 SNGPGDPATLKDEIAEIAK--LAQTYPTAGICLGHQLLGHALGGRTMKLKFGHHGCNHPV 293
           SNGPGDPA   +    + +  +    P  GICLGHQ+LG A+G +T K+  GHHG NHPV
Sbjct: 253 SNGPGDPAATGEYAVPVIQNLIKSELPIFGICLGHQMLGLAVGAKTEKMHQGHHGANHPV 312

Query: 294 KDLTTGRIEISSQNHGFCVDIDSLTD-VEITHVNLNDGTLEGFAHKTKPVIAVQHHPEAS 352
           KD TTG++EI S NHGF VD  SL + VE TH +L DGT  G     KPV +VQHHPEAS
Sbjct: 313 KDFTTGKVEIVSMNHGFAVDTKSLPEGVEETHTSLFDGTNCGLRIVGKPVFSVQHHPEAS 372

Query: 353 PGPNDSRYFFARFRNMVREAAG 374
           PGP DS Y F RF N++RE  G
Sbjct: 373 PGPQDSHYLFRRFVNLLRENKG 394