Pairwise Alignments

Query, 577 a.a., ATP-dependent RNA helicase, DEAD/DEAH box family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 631 a.a., DEAD/DEAH family ATP-dependent RNA helicase from Dickeya dadantii 3937

 Score =  278 bits (711), Expect = 5e-79
 Identities = 176/477 (36%), Positives = 250/477 (52%), Gaps = 17/477 (3%)

Query: 44  LAPRLQEACIRAGWQSLMPVQAHALPYLFDGRDLMVQSRTGSGKTGAFLLPLLERLDPAE 103
           L+  +  A    G++   P+QA  +P+L +GRD++  ++TGSGKT AF LPLL  +    
Sbjct: 13  LSAPILNALSEMGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLNNIKADL 72

Query: 104 ASTQALVLVPTRELALQVEHEARTLFEGT-GLRVAAVYGGVGYGKQNDALREGAHFVVGT 162
            + Q LVL PTRELA+QV        +   G+ V A+YGG  Y  Q  ALR+G   VVGT
Sbjct: 73  KAPQLLVLAPTRELAVQVAEACNEFSKHMQGVNVVALYGGQRYDVQLRALRQGPQIVVGT 132

Query: 163 PGRVLDHLLRRTMQLDRLRALTFDEADRMLSIGFYPDMKEIQRYLPKRRIATCLFSATYP 222
           PGR+LDHL R T+ L  L  L  DEAD ML +GF  D++ I   +P     T LFSAT P
Sbjct: 133 PGRLLDHLKRGTLDLSNLSGLVLDEADEMLRMGFIEDVENIMAQIPAEH-QTALFSATMP 191

Query: 223 PHVLNLAGEFLREPQMLSLSHSQVHVAQTQHMFCESKPMDKDRALIRLLEIENPSSAIIF 282
             +  +   F+ +PQ + +  S          +     M K+ ALIR LE E+  +AIIF
Sbjct: 192 EAIRRITRRFMNDPQEVRIQSSVTTRPDISQSYWTVYGMRKNEALIRFLEAEDFDAAIIF 251

Query: 283 CNTKANVHYITAVLQGFGYNADELSADLSQSKREQVLERLRNNEVRFLVATDVAARGIDI 342
             TK     +   L+  GYN+  L+ D++Q+ REQ LERL++  +  L+ATDVAARG+D+
Sbjct: 252 VRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRLDILIATDVAARGLDV 311

Query: 343 PALSHVILYEPPEDRESYIHRAGRTGRAGAVGTVISLVDIMQKLELQRIARHYRMDIAHR 402
             +S V+ Y+ P D ESY+HR GRTGRAG  G  +  V+  ++  L+ I R  ++ I   
Sbjct: 312 ERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNIERTMKLTIPEV 371

Query: 403 PTPQDEDVARVVGDRLTALLEGAYRQCTGLQRERIQRFTDVARTLAADEEQV---VLLAM 459
             P     A ++G R  A   G  +Q   L+   +  +  +   L   +E++    L A 
Sbjct: 372 DLPN----AELLGQRRLAQFAGKVQQ--QLESSDLDMYRALLSKLQPQQEELDIETLAAA 425

Query: 460 LLDEKYQQSLHAMPPRP----RPQRASASRAVDSESDTAPRRRSRGRRDDEGSTGGD 512
           LL     +    +PP P    RP+R    R  D   +    R  RG R+D    G D
Sbjct: 426 LLKMAQGERPLILPPDPVVERRPRREFRER--DERFERRGDRNDRGDRNDRAPRGDD 480