Pairwise Alignments

Query, 1223 a.a., sensory box histidine kinase/response regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 995 a.a., PAS domain S-box protein from Magnetospirillum magneticum AMB-1

 Score =  268 bits (685), Expect = 2e-75
 Identities = 158/401 (39%), Positives = 240/401 (59%), Gaps = 11/401 (2%)

Query: 822  DVTSRKQWEEQMRASRDEAAAMSELKSQFVANISHEMRTPLSGILGIADVALTTEGNPAL 881
            DVT+ K+ E Q+R S+  A A ++ KS F+AN+SHE+RTP++GI+G+A +AL  E  PA 
Sbjct: 441  DVTAIKEIEAQLRESKSVAEAANKAKSLFLANMSHEIRTPMNGIIGMAHLALGGE-LPAK 499

Query: 882  LRNYFSMVQNVAEGLLGVINDLLDFSRLEAGRMPLDKVEYDLHTTVRDALAPLAMQAERK 941
             R++   ++  A+ LLG+IND+LD S+ EAG++ +D   +DL   + +A++ +A QA  K
Sbjct: 500  QRHHIQSIKQSAQRLLGIINDILDLSKAEAGKVVIDAAPFDLANLIDEAISVVAAQASEK 559

Query: 942  GLALELHMQNGLPLTLRGDPLRLRQILVNLVGNAVKFTPQGTVHVDVSTGDGVTHDRECL 1001
             L + + + + +P  + GDPLR+RQIL+N + NAVKFT  G + VDV    G T     L
Sbjct: 560  RLPINVRIASEVPRGVIGDPLRIRQILLNYLSNAVKFTSSGGIDVDVQIEGGKTAPPTKL 619

Query: 1002 VFTIEDTGPGIPHEKLAHIFESFAQADGSYSRQHTGSGLGLAISRHLVELQGGDIGVQST 1061
             F + DTG G+  E+ A +F+SF QA+ S S +  G+GLGLAI+R L EL GG  GV+S 
Sbjct: 620  RFAVSDTGCGLTPEQQATLFQSFQQAEASTSAKFGGTGLGLAIARQLAELMGGQAGVESQ 679

Query: 1062 PGEGSVFWFTLPL-----GDIHPARRTQRQRVDLDTRTPTTPL----RILLAEDNELNRE 1112
             G GS FWFT+       G   P++     ++  +       +    ++LLAED+  N+ 
Sbjct: 680  YGSGSTFWFTVQFQGAVDGVDCPSKFLSPIKIHNNFAHQDHSILQGAQVLLAEDDLTNQM 739

Query: 1113 FLTIFLEEGGHSVVTACDGYEVLDILHREHVDLVLMDIQMPRMNGMEATRSIRSSGEAWS 1172
                 LE  G  V    +G   ++       ++VLMD++MP M+G+ ATR IR + E   
Sbjct: 740  VAVGLLEAAGMLVDVVGNGAAAVEKAASGKYEIVLMDVRMPGMDGITATRLIRENVELLD 799

Query: 1173 TVPVIALTAHSMAGDRDRFIAEGMSDFVGKPVDRNELHAAI 1213
             +P++A+TA++M   +D  +A GMSDFV KP    +L+  I
Sbjct: 800  -LPIVAMTANAMNEHKDECLAAGMSDFVSKPFQPEQLYGVI 839