Pairwise Alignments

Query, 1223 a.a., sensory box histidine kinase/response regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 1258 a.a., PAS domain S-box protein from Magnetospirillum magneticum AMB-1

 Score =  239 bits (611), Expect = 8e-67
 Identities = 150/410 (36%), Positives = 230/410 (56%), Gaps = 14/410 (3%)

Query: 810  EGVAHDVMLLLQDVTSRKQWEEQMRASRDEAAAMSELKSQFVANISHEMRTPLSGILGIA 869
            +G     ++  +D+T RK+ +  +  + D A A S+ K+ F+AN+SHE+RTP++ I+G++
Sbjct: 576  DGTVVGTVVTFRDITERKRADALLHQALDRAEAASQAKADFLANMSHEIRTPMNAIIGMS 635

Query: 870  DVALTTEGNPALLRNYFSMVQNVAEGLLGVINDLLDFSRLEAGRMPLDKVEYDLHTTVRD 929
             +AL TE NP   R+Y   +Q   + LLG+IND+LDFS++EAG++ ++K    L T + +
Sbjct: 636  HLALKTELNPRQ-RDYVRKIQQSGQHLLGIINDILDFSKIEAGKLSVEKTAVHLDTVLDN 694

Query: 930  ALAPLAMQAERKGLALELHMQNGLPLTLRGDPLRLRQILVNLVGNAVKFTPQGTVHVDVS 989
                ++ +   KGL L   + + +P  + GDPLRL QIL+N   NAVKFT  G + V V 
Sbjct: 695  VANLISEKTIAKGLELIFDVASDVPNDMVGDPLRLGQILINYANNAVKFTETGEIVVAVR 754

Query: 990  TGDGVTHDRECLVFTIEDTGPGIPHEKLAHIFESFAQADGSYSRQHTGSGLGLAISRHLV 1049
              + +  +   L F + DTG G+  E++  +F+SF QAD S +R++ G+GLGLAISR L 
Sbjct: 755  LAEDLG-EAVRLRFEVRDTGIGLSAEQMGRLFQSFQQADTSTTRKYGGTGLGLAISRKLA 813

Query: 1050 ELQGGDIGVQSTPGEGSVFWFTLPLGDIHPARRTQRQRVDLDTRTPTTPLRILLAEDNEL 1109
            EL  G++GV+S PG GS FWFT  LG   P RR    + DL  R       +L+ +DNE 
Sbjct: 814  ELMDGEVGVESQPGRGSTFWFTACLGKGRP-RRALVPKPDLRGR------HMLVVDDNEN 866

Query: 1110 NREFLTIFLEEGGHSVVTACDG----YEVLDILHREHVDLVLMDIQMPRMNGMEATRSIR 1165
             R  L   L      V     G      V ++   +  ++V +D QMP M+G+E  R+I 
Sbjct: 867  ARAVLVDMLTSMSFRVEAVESGAAAVARVREVAGAKPFEVVFLDWQMPGMDGIETARAIL 926

Query: 1166 SSGEAWSTVPVIALTAHSMAGDRDRFIAEGMSDFVGKPVDRNELHAAIAR 1215
              G   S   +I +TAH          + G+ D + KPV+ + +  A+ R
Sbjct: 927  GLG-LTSPPHMIMVTAHGREEVMKAAESAGIEDVLIKPVNPSIMFDAVMR 975



 Score =  102 bits (255), Expect = 2e-25
 Identities = 57/137 (41%), Positives = 83/137 (60%), Gaps = 2/137 (1%)

Query: 1079 PARRTQRQRVDLDTRTPTTPLRILLAEDNELNREFLTIFLEEGGHSVVTACDGYEVLDIL 1138
            P      + V  D       LR+LLAEDN+ N++  T  L +GG  V  A +G   +D++
Sbjct: 985  PEEAAAGREVSDDALASLRGLRVLLAEDNDFNQQVATELLADGGVEVEVAENGKIAVDMV 1044

Query: 1139 HREHVDLVLMDIQMPRMNGMEATRSIRSSGEAWSTVPVIALTAHSMAGDRDRFIAEGMSD 1198
                 D+VLMD+QMP M+G+ ATR IR  G  +  +PVIA+TA++M  DRDR  A GM+D
Sbjct: 1045 MAAPYDMVLMDMQMPVMDGVAATREIRRLG--FGDLPVIAMTANAMQADRDRCAAAGMND 1102

Query: 1199 FVGKPVDRNELHAAIAR 1215
            ++ KP+D +EL A + +
Sbjct: 1103 YLTKPIDPDELFACLLK 1119