Pairwise Alignments

Query, 1223 a.a., sensory box histidine kinase/response regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 809 a.a., PAS domain-containing protein from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  278 bits (711), Expect = 1e-78
 Identities = 196/590 (33%), Positives = 296/590 (50%), Gaps = 35/590 (5%)

Query: 641  RDGVAPPQHHQPPAGDGYRTVIPFTTVSGEQRHGQLHLRTLRDVSGNAVVTRGAMQDVTY 700
            R G+     H    GDGY+  +      GE+R      R  RD +G   V  G  QD+T 
Sbjct: 218  RPGLLAAIAHSAETGDGYKMRLRLIRADGEERTVLTQARAERDDAGVVKVLYGVFQDITD 277

Query: 701  RVSIENALRRSESSYRALADNL--------PNGVVLLVDPADILRVAAGQGLHSLLDSGA 752
            + +     +R E+ YR LA+N+        P+G    + PA          + SLL    
Sbjct: 278  QQAQIARAQRDEARYRLLAENVGDVITRVRPDGTSKYISPA----------IESLLGWTT 327

Query: 753  PCI---PAPYTTILPSPLATE-LMPLIMSARHGTTAHREIPYGAAVFDVVAL--PLPGET 806
              +   P  Y       + T  ++  I +       HR +    ++  V      L  E 
Sbjct: 328  EEMNGRPMDYVHPDDREMVTRAVLGTIHTKEPCRLEHRALHRDGSIVWVECTFRALAAEA 387

Query: 807  HRTEGVAHDVMLLLQDVTSRKQWEEQMRASRDEAAAMSELKSQFVANISHEMRTPLSGIL 866
                G   +V+++++D+T RK   +++  +RD A A +  KS+F+AN+SHE+RTPL+ ++
Sbjct: 388  ----GKPSEVVVVIRDMTDRKILADELVTARDRAEAAAAAKSEFLANMSHELRTPLTSVI 443

Query: 867  GIADVALTTEGNPALLRNYFSMVQNVAEGLLGVINDLLDFSRLEAGRMPLDKVEYDLHTT 926
            G +++   +E  P   + Y + +   +E LL VIND+LD+S+LEAG + L+   ++    
Sbjct: 444  GFSNLLKASEALPEAEKGYVARIATASEALLSVINDVLDYSKLEAGMIELEPQRFNPAAL 503

Query: 927  VRDALAPLAMQAERKGLALELHMQNGLPLTLRGDPLRLRQILVNLVGNAVKFTPQGTVHV 986
              + +  +  Q   KGLAL + +   +P  L GD  RLRQIL+NL+GNAVKFT QG+V +
Sbjct: 504  AHETVQMMEAQCLAKGLALHVDLAPDMPDCLMGDQARLRQILLNLLGNAVKFTSQGSVSL 563

Query: 987  DVSTGDGVTHDRECLVFTIEDTGPGIPHEKLAHIFESFAQADGSYSRQHTGSGLGLAISR 1046
             V  G    +    L   + DTG G+  +  AH+FE F+QAD S +R + G+GLGLAISR
Sbjct: 564  SVG-GALEANGAWRLTAEVTDTGIGMSPQTQAHLFERFSQADRSTTRLYGGTGLGLAISR 622

Query: 1047 HLVELQGGDIGVQSTPGEGSVFWFTLPLGDIHPARRTQRQRVDLDTRTPTTPLRILLAED 1106
             L     GDI V S PG GS F  T+PL         +  R+ +         R+L+A+D
Sbjct: 623  RLARAMDGDIVVTSQPGLGSTFKVTVPLHIAEGGSEAEGPRLSVMPEG-----RVLIADD 677

Query: 1107 NELNREFLTIFLEEGGHSVVTACDGYEVLDILHREHVDLVLMDIQMPRMNGMEATRSIRS 1166
               NRE +++ L   G  V TA DG E +  +  E  DLVLMD+QMP M+G+ ATR IR 
Sbjct: 678  APANRELISVILVGMGLEVATASDGAEAVHAVQSEVYDLVLMDMQMPVMDGLTATREIRR 737

Query: 1167 SGEAWS-TVPVIALTAHSMAGDRDRFIAEGMSDFVGKPVDRNELHAAIAR 1215
                    +P+IAL+A+            GM D + KP+    L A +++
Sbjct: 738  IEHGGGRRLPIIALSANVQPDQIQLCRDAGMDDHLAKPLQLPALVATLSK 787



 Score = 42.4 bits (98), Expect = 2e-07
 Identities = 34/134 (25%), Positives = 53/134 (39%), Gaps = 21/134 (15%)

Query: 460 QRIARLGSFEANFVTGDCVWSHELLRLVGLSPDDAPASLESFFERFAPEQRAWLETLLHG 519
           + +A +G +     +G   WS E+ R+ GL        ++S  +R+ P+ R         
Sbjct: 168 ENMAGVGHWRLELASGKVHWSDEVFRIHGLDRKTFDPQVDSAIDRYHPDDRP-------- 219

Query: 520 PMQGPLAVIEHS------FPFRT----ADDRNRHGRLHLHFHRGESGMPAIGYGTMQDIT 569
              G LA I HS      +  R     AD   R         R ++G+  + YG  QDIT
Sbjct: 220 ---GLLAAIAHSAETGDGYKMRLRLIRADGEERTVLTQARAERDDAGVVKVLYGVFQDIT 276

Query: 570 ELHEATIALKRSEA 583
           +        +R EA
Sbjct: 277 DQQAQIARAQRDEA 290



 Score = 26.9 bits (58), Expect = 0.007
 Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 1/57 (1%)

Query: 11  RQGRASSLAQGLASLRALGLLPFAIALSILLLGISTARHIHVRYIENLE-TQHRRLE 66
           RQ R       +A+LR LG +   I  S+ +  +S  RH  +  IEN+    H RLE
Sbjct: 123 RQPRPHPTDAQIATLRTLGAMAEDIMASLEVGRVSDERHGTLELIENMAGVGHWRLE 179