Pairwise Alignments

Query, 603 a.a., methyl-accepting chemotaxis protein, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 630 a.a., methyl-accepting chemotaxis protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  319 bits (817), Expect = 3e-91
 Identities = 190/421 (45%), Positives = 267/421 (63%), Gaps = 12/421 (2%)

Query: 180 GVYIDNIDATKTAISKDMGDVVADEVTRLFLIIAAVLVLGVIPLCVLIITGIVRPLREAT 239
           GV + +I A   AI+K     V   +  +F++ AA                + RP+   T
Sbjct: 220 GVPLASIQA---AIAKVEQSTVGVSLGIMFVMAAAAFFFA---------RSLARPIGITT 267

Query: 240 GAAQGVAAGNLDIRIVEQGRDEVAQLQKALNSMVATLRTNMDDIKAKEAEANRQADVARD 299
             A  VAAG ++  +     DEV QL  AL +MV++L+  + + +A+   A  +   A+ 
Sbjct: 268 AFAGKVAAGQMNETLDVHSNDEVGQLADALRTMVSSLKEKIAEAQAQSERAAEETVRAQQ 327

Query: 300 AARQADEARMKAAAATREGMLTAASRLEGVVKRINGATSDLERRAGDIDRGTDNQLARIG 359
           A R+ADEAR +A  A REGML AA RL G+V  +  A+  L  +     RG   Q  R G
Sbjct: 328 ATREADEARREAENARREGMLQAADRLSGIVNVVGAASEQLSAQIEQSSRGALLQSQRAG 387

Query: 360 ETATAMEEMNATVLEVARNAGRAAEQTDSSRAQAENGAEMVSRTVKAMEDLKQLATGLKD 419
           ETATAMEEMNATVLEVAR+A  AA  +D++R +AE GA +V   V  +  +++ +  L++
Sbjct: 388 ETATAMEEMNATVLEVARSASEAAASSDATRDKAEAGAGIVKSVVDGIAGVQRRSETLQE 447

Query: 420 NMHRLGQQSEAIGHVMNVINDIADQTNLLALNAAIEAARAGEAGRGFAVVADEVRKLAEK 479
            M+ LG+++E IG +MNVI+DIADQTNLLALNAAIEAARAG+AGRGFAVVADEVRKLAEK
Sbjct: 448 GMNDLGKRAEEIGRIMNVISDIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEK 507

Query: 480 TMGATKEVGDSIRAIQGLARTNVDSMDEAVSAIDGAARLSSSSGDLLKEIVRTAHDAAGQ 539
           TM ATKEVG++I  IQ    TNV  + E V  I+ A + +  +G+ L EIVR A  A+ Q
Sbjct: 508 TMNATKEVGEAIVGIQKGTHTNVAHVGETVREIETATKHAHEAGNALHEIVRLAEAASDQ 567

Query: 540 VQAIVAAAEEQSAASEEITRSVEDINRIARDSGELIRAANNDIRDLAEQAEELHQLINAL 599
           V++I  A+EEQSAAS+EI R++E++NRIA ++ + +  +   + +LAEQA++L  +I  +
Sbjct: 568 VRSIATASEEQSAASDEINRAIEEVNRIASETSDAMGQSAQAVGELAEQAQQLQSIITEM 627

Query: 600 K 600
           +
Sbjct: 628 Q 628



 Score = 28.5 bits (62), Expect = 9e-04
 Identities = 41/177 (23%), Positives = 68/177 (38%), Gaps = 33/177 (18%)

Query: 260 DEVAQLQKALNSMVATLRTNMDDIKAKEAEANRQADVARDAARQADEARM---KAAAATR 316
           +E+ ++   ++ +    +TN+  + A   EA R  D  R  A  ADE R    K   AT+
Sbjct: 457 EEIGRIMNVISDIAD--QTNLLALNAA-IEAARAGDAGRGFAVVADEVRKLAEKTMNATK 513

Query: 317 E----------GMLTAASRLEGVVKRINGATSD-------------LERRAGD----IDR 349
           E          G  T  + +   V+ I  AT               L   A D    I  
Sbjct: 514 EVGEAIVGIQKGTHTNVAHVGETVREIETATKHAHEAGNALHEIVRLAEAASDQVRSIAT 573

Query: 350 GTDNQLARIGETATAMEEMNATVLEVARNAGRAAEQTDSSRAQAENGAEMVSRTVKA 406
            ++ Q A   E   A+EE+N    E +   G++A+       QA+    +++   +A
Sbjct: 574 ASEEQSAASDEINRAIEEVNRIASETSDAMGQSAQAVGELAEQAQQLQSIITEMQQA 630