Pairwise Alignments

Query, 458 a.a., response regulator/sensory box/HDIG domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 350 a.a., Cyclic di-GMP phosphodiesterase response regulator RpfG from Pseudomonas sp. RS175

 Score =  112 bits (280), Expect = 2e-29
 Identities = 70/215 (32%), Positives = 113/215 (52%), Gaps = 5/215 (2%)

Query: 238 AGAVLVMRDVTERRRAEETLHATLDDLQRAFRQTVSALAATSEKRDPYTAGHQARVAQLA 297
           A A  ++RDV      +  L      L  +++   S+L+  +  RD  T  H  R+ + +
Sbjct: 129 AQAAKLLRDVNAELERKVELRTV--QLASSYKAISSSLSRAASYRDDDTGQHIVRIGESS 186

Query: 298 CALASRLDLGAHAIEGVRVAAMLHDIGKIHIPSEILAKPTRLSDLEMSIMRMHSEVGHDI 357
             LA  + + +   E +++AA +HDIGKI I   IL KP  L+  E  +M+ H+ +G++I
Sbjct: 187 ALLAKAIGMPSQWCELLKMAAPMHDIGKIGIADAILQKPGALTPQEREVMQEHARIGYEI 246

Query: 358 LREIS---FPWPVADIVLQHHERLDGSGYPHGLAGDAILPAARIIAVADVVEAMSSHRPY 414
           L +          A+I L HHER DG+GYP GL G  I  +ARI+++ DV +A+   R Y
Sbjct: 247 LHDPDGSPLTDLAAEIALAHHERWDGTGYPKGLRGKEIPLSARIVSICDVYDAIRMPRAY 306

Query: 415 RPARGLGLAFDEIMSGRGARYDAAVVDACQSLFAE 449
           + A  +  +   I    G ++D ++VD   +LF E
Sbjct: 307 KQAWDVERSRRFITDQAGTQFDPSLVDVFCNLFDE 341