Pairwise Alignments

Query, 349 a.a., sigma-54 dependent transcriptional regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 480 a.a., Nitrogen regulation protein NR(I) from Pseudomonas putida KT2440

 Score =  260 bits (664), Expect = 6e-74
 Identities = 134/234 (57%), Positives = 167/234 (71%)

Query: 7   GIIGQSTTLCQVFRMLGKVAPTDSTVLVTGESGTGKELLVRALHANSQRAQQPFVPINCG 66
           GIIG    +  ++  + KVAPTDS VL+ GESGTGKEL+ RALH  S+RA+ P + +NC 
Sbjct: 151 GIIGSCQPMQDMYSKIRKVAPTDSNVLIQGESGTGKELVARALHNLSRRAKAPMISVNCA 210

Query: 67  AIPKDLLESELFGHEKGAFTHAIRSRPGRFELADGGTIFLDEIGEMDLMLQVKILRVLQE 126
           AIP+ L+ESELFGHEKGAFT A   R G  E ADGGT+FLDEIGE+ L  Q ++LRVLQE
Sbjct: 211 AIPETLIESELFGHEKGAFTGASAGRAGLVEAADGGTLFLDEIGELPLEAQARLLRVLQE 270

Query: 127 KEIERVGGTGTKKVDVRIVAATNRDLEREVAAGRFREDLYYRLNVIPLHLPPLRERGGDI 186
            EI RVG   ++KVDVR++AAT+RDL+    AG+FREDLYYRL+VI L LP LRERG D+
Sbjct: 271 GEIRRVGSVQSQKVDVRLIAATHRDLKNLAKAGQFREDLYYRLHVIALKLPALRERGSDV 330

Query: 187 LVLAEHFLERFCERKQRARLALAPDTRKVLAAYSWPGNIRELENFMERVSILAE 240
             +A  FL R   R  R  L  + +  + +  YSWPGN+RELEN +ER  IL+E
Sbjct: 331 NEIANVFLARQSARIGRDDLHFSAEAEQAIRHYSWPGNVRELENAVERAVILSE 384