Pairwise Alignments

Query, 336 a.a., TRAP dicarboxylate family transporter (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 327 a.a., Extracytoplasmic solute receptor protein YiaO from Alteromonas macleodii MIT1002

 Score =  137 bits (344), Expect = 5e-37
 Identities = 96/320 (30%), Positives = 161/320 (50%), Gaps = 11/320 (3%)

Query: 16  IAMLAAGSYAEAAKRITI-RLAHPMAPGNNVTLGYEKFKEIVEAKSNGKVRIQLFGNCML 74
           + + +A S  E    +T+ RL H +   ++V    E   E ++  S+G + + ++ +  L
Sbjct: 14  LLLTSACSQNELQGEVTVLRLGHTLDTQHSVHKAMEYLGERLDYYSDGTMSVVIYPSSQL 73

Query: 75  GSDRVTMEATQRGTLEMASSSSPNMTNFSKEMMVFDLPYITSPEHQEKLYKALDEGALGE 134
           G++R  +E  Q G+L M   S+  +  F+ EM +F +PYI      E  ++ L+   LG+
Sbjct: 74  GTEREMVELLQIGSLAMTKVSASPLEGFAPEMKIFSIPYIF--RDNEHFWRVLNSD-LGD 130

Query: 135 RLDAIAAGIGLKPIMYSEYGYRNFATTKKPIKTADDLKNLKVRTTDSPIEVAVASALGMN 194
            L +      LK + Y + G R+F T  KPI+T  DL  LK+R  +SP  VA   ALG  
Sbjct: 131 ELLSGVEDFRLKGLGYYDAGSRSFYTNDKPIETPSDLNGLKIRVLNSPTAVATVRALGGA 190

Query: 195 PTPVSWGETYTALQQGTVDGEGNTFGLLNDAKHTEVLRHAMDSAHNYSMHLLMINKAYFD 254
            TPV+WGE YTALQQG VDG  N       ++H E+ R+     H     +++ +   ++
Sbjct: 191 ATPVAWGELYTALQQGVVDGAENNPPSYYLSRHYEIARYYSLDEHTSVPDVMLASLPVWE 250

Query: 255 KLPADVQQILVDSGKEALAYQRAISNDLEKKAEQAFVE--RGIVITKLAPEERAKMRELT 312
            L    Q  L  + ++++ YQR    +L K + QA +E  +   +T + P ++A   E  
Sbjct: 251 SLNEQQQTWLTKAMEDSVEYQR----ELWKTSTQASLEKVKAEGVTVITP-DKAPFVEAV 305

Query: 313 RPVWDKFSNDIPADLVKLVQ 332
           +P    F +    DL+  ++
Sbjct: 306 KPFHKSFEDTPIGDLITQIK 325