Pairwise Alignments

Query, 321 a.a., conserved hypothetical protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 290 a.a., membrane protein from Pseudomonas simiae WCS417

 Score =  120 bits (301), Expect = 4e-32
 Identities = 101/309 (32%), Positives = 148/309 (47%), Gaps = 28/309 (9%)

Query: 16  KSFFVAAFCAALVLCMSPLADAKRMGGGGSFGSRPSMQRSFTPTPQQAPQMQRQQTPTQQ 75
           K F   A    + L MS  A+AKR GGG S G+ P+ Q     T Q AP      +    
Sbjct: 2   KRFLSIAMALCIGLTMSLDANAKRFGGGKSSGAAPTHQ-----TSQMAP------SAGAT 50

Query: 76  GINQQNPGAAQQPGMAQQPRRGLFGGMGGFLG---GMLAGGLLGSLFFGGGFGGMPGILD 132
           G      GAA   G A +      GG   +LG   G+ AGGLL S+F GGGF GM  I D
Sbjct: 51  GGAAATAGAAGAAGAAAKA-----GGASRWLGPLAGIAAGGLLASMFMGGGFQGMQ-IFD 104

Query: 133 MLLLALVAYGIFKFISMRRQAANPQPAAAGYGAHTSPSDNDNGWGTLRSAPQGGTTYQEQ 192
           +L+LA++A+ IF+FI+ RR+      A AG        +     G++     GG+     
Sbjct: 105 ILILAVIAFVIFRFIAARRRKQQEHLAPAGAPMQREVFEQKPAMGSIF----GGSAAPAA 160

Query: 193 AGPEV--PAGFDIEQFIKGAKMAFTRLQASWDKRDLEDISQFSTPAVLDEIRRQ-AEADP 249
           A P +  PA F+ E+F++ A+  F  LQ  WD  +++ IS+F TP +L+ ++R+ A+   
Sbjct: 161 ARPVINAPAWFNEERFVEAARSHFQSLQQHWDANEMDKISEFVTPQLLEFLKRERADLGD 220

Query: 250 VPSTTEILLVNANLLGVVEENGQQTATVFFDVLLREDPRQDAPTSVREVWHFVRPVKGTG 309
              +T I  +   L GV +   +  AT+ F  + +   R D      E W+  R      
Sbjct: 221 GFQSTYIDDLRVQLEGVDDRADKTIATLTFSGVSKTS-RFDQGEVFSESWNMERAQGDNQ 279

Query: 310 MWQLDGIQQ 318
            W + GI+Q
Sbjct: 280 PWLVAGIRQ 288