Pairwise Alignments

Query, 441 a.a., D-alanyl-D-alanine carboxypeptidase family protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 356 a.a., D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  174 bits (441), Expect = 4e-48
 Identities = 96/239 (40%), Positives = 145/239 (60%), Gaps = 7/239 (2%)

Query: 48  IDQNSRRVLFEQNADAQIPPASLTKVISMYVALDHIRAGKASLADKVKISARAARTGG-- 105
           +D  S +VL E NAD ++ PASLTK+++ YV    ++AGK  L D V +   A  TG   
Sbjct: 1   MDYASGKVLAEGNADEKLDPASLTKIMTSYVVGQALKAGKIKLTDMVTVGKDAWATGNPA 60

Query: 106 ----SRMFLTRGETVSLDELLMGMAVSSGNDASVAVAEHIAGSTDRFVQLMNAKARALGM 161
               S MFL  G+ VS+ +L  G+ + SGNDA +A+A+++AGS + F+ LMNA A+ LG+
Sbjct: 61  LRGSSVMFLKPGDQVSVADLNKGIIIQSGNDACIALADYVAGSQESFIGLMNAYAKRLGL 120

Query: 162 TETTFRNVNGLPAAGQKTTARDMGKLAVSYLTAHPQALRYHSTRFIRHNKVITTNKNPML 221
           T TTF+ V+GL A GQ +TARDM  L  + +   P     H  +    N +   N+N +L
Sbjct: 121 TNTTFQTVHGLDAPGQFSTARDMALLGKALIHDVPDEYAIHKEKEFTFNNIRQPNRNRLL 180

Query: 222 GNCE-GADGLKTGWVCASGYNLISTVKRGNTRLVAVVLGAENSQVRGQEMNRLIDAGYR 279
            +     DG+KTG    +GYNL+++  +G+ RL++VVLGA+  ++R  E  +L+  G+R
Sbjct: 181 WSTNLHVDGMKTGTTAGAGYNLVASATQGDMRLISVVLGAKTDRIRFNESEKLLTWGFR 239