Pairwise Alignments

Query, 441 a.a., D-alanyl-D-alanine carboxypeptidase family protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 400 a.a., D-alanyl-D-alanine carboxypeptidase; penicillin-binding protein 6a from Escherichia coli BL21

 Score =  175 bits (443), Expect = 3e-48
 Identities = 96/240 (40%), Positives = 146/240 (60%), Gaps = 7/240 (2%)

Query: 47  LIDQNSRRVLFEQNADAQIPPASLTKVISMYVALDHIRAGKASLADKVKISARAARTGG- 105
           L+D  S +VL E NAD ++ PASLTK+++ YV    ++A K  L D V +   A  TG  
Sbjct: 44  LMDYASGKVLAEGNADEKLDPASLTKIMTSYVVGQALKADKIKLTDMVTVGKDAWATGNP 103

Query: 106 -----SRMFLTRGETVSLDELLMGMAVSSGNDASVAVAEHIAGSTDRFVQLMNAKARALG 160
                S MFL  G+ VS+ +L  G+ + SGNDA +A+A+++AGS + F+ LMN  A+ LG
Sbjct: 104 ALRGSSVMFLKPGDQVSVADLNKGVIIQSGNDACIALADYVAGSQESFIGLMNGYAKKLG 163

Query: 161 MTETTFRNVNGLPAAGQKTTARDMGKLAVSYLTAHPQALRYHSTRFIRHNKVITTNKNPM 220
           +T TTF+ V+GL A GQ +TARDM  L  + +   P+    H  +    NK+   N+N +
Sbjct: 164 LTNTTFQTVHGLDAPGQFSTARDMALLGKALIHDVPEEYAIHKEKEFTFNKIRQPNRNRL 223

Query: 221 LGNCE-GADGLKTGWVCASGYNLISTVKRGNTRLVAVVLGAENSQVRGQEMNRLIDAGYR 279
           L +     DG+KTG    +GYNL+++  +G+ RL++VVLGA+  ++R  E  +L+  G+R
Sbjct: 224 LWSSNLNVDGMKTGTTAGAGYNLVASATQGDMRLISVVLGAKTDRIRFNESEKLLTWGFR 283