Pairwise Alignments

Query, 569 a.a., conserved hypothetical protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 561 a.a., phage tail protein from Serratia liquefaciens MT49

 Score =  291 bits (744), Expect = 6e-83
 Identities = 177/504 (35%), Positives = 268/504 (53%), Gaps = 19/504 (3%)

Query: 19  RRVWEPLWREVEDFVLPRCIDSPRRADEAGDTARRGPRIIDGTATRAVRILAAGMQGGLT 78
           R  ++  W+E+ DF+LP C    R         +R  +++D T   A R L +GM  G+T
Sbjct: 22  RSSYDSHWKELSDFILPNC---GRFLTTDAGRNKRNTKVVDPTGGLASRTLESGMLSGIT 78

Query: 79  SPARPWFRLRLADEDMEEAGPERRWLDVVERRLYAALARSNFYAAVHGLYTELAAFGSAD 138
           SP RPWF L   ++ + ++ P + WL  V   +   + +SN+Y ++  LY  L  F +  
Sbjct: 79  SPTRPWFSLNTPNKQLMDSWPVKMWLSQVVELMNDVMNKSNWYQSLTVLYRYLGTFATGA 138

Query: 139 MYHEADPQRVMRFSCLACGDFAWACDAAGRVDTVVRRLRMSARQMAQRYGEARLSRRVRR 198
           +    D + V+R   L  G +  +     +VDTV R+  M+ RQ+  ++G   +S  V+ 
Sbjct: 139 ISILEDDEDVIRTHVLPIGSYYISNSDRLQVDTVFRKFSMTCRQLVAKFGLDNVSDSVKS 198

Query: 199 MLRRDP-ERSVPLVHMVRPRVRRNAGEAGKTASGGLGGVNMPWQSLTWETEGA-EGLLHE 256
                  E    +VH V P   R+ G+        L   N  + S+ ++  G  + LL E
Sbjct: 199 AWDTGSYETWFEVVHAVLPNTNRDTGK--------LNSKNKRYSSVYYQPGGGGDKLLSE 250

Query: 257 GGFEEFPHLAARWDVAGGDIYGRS-PGMDVLPDVKMLQEMARSQLLAIHKVVNPPMRVPS 315
            GF+E P L  RWD+ G D YG S PG+  L  VK LQ   + +  AI K+VNPPM  PS
Sbjct: 251 SGFDEMPILVPRWDINGEDAYGSSCPGILALGGVKALQLQQKRKDQAIDKLVNPPMMAPS 310

Query: 316 GFK-QRLNLIPGGQNYVTPGQGESVG--PLYQINPDIGAVTHKMEDVRRAVREGFFNDLF 372
             K +RL+L+PG   Y   G G++ G  P+Y+INP I  +   ++D R+   E +F  LF
Sbjct: 311 SMKNERLSLLPGDVTYYN-GAGDTQGFKPVYEINPRISELLESIQDGRQLTNECYFVPLF 369

Query: 373 LMFTAEGRSNITAAEVLERGEEKLLMLGPVIERHQSELLDPLLERTYGILRRGGLLPPPP 432
            MF+     ++    V E  +EK+L +GPV++R   ELLDP ++R + I+ R G+LPPPP
Sbjct: 370 NMFSNINTRSMPIEAVNEMRDEKMLQIGPVLDRLNDELLDPAIDRIFNIMNRRGMLPPPP 429

Query: 433 PELAGRSMRVEYVSALAQAQRVVTAQAIRRFASDVSALAGVA-PQVLDKVDFEQAVDELA 491
            EL G+ +RVEY S +AQAQ+ V   +I RF   +  +A     Q  DK+D +QA+DE  
Sbjct: 430 EELQGQPLRVEYTSVMAQAQKAVGIGSIERFVGFIGNMAAAGFQQAADKLDVDQAIDEYG 489

Query: 492 AIAGVPARVVRSDAEVATLRAARN 515
            + GVP  + +SD +V   R  R+
Sbjct: 490 DMLGVPTTITKSDEQVQAEREQRS 513