Pairwise Alignments

Query, 1373 a.a., response regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 731 a.a., Sensor histidine kinase RcsC from Azospirillum sp. SherDot2

 Score = 87.0 bits (214), Expect = 6e-21
 Identities = 122/486 (25%), Positives = 184/486 (37%), Gaps = 61/486 (12%)

Query: 523 AEAGRATPEGPRNVDPALLARMEDALRQPMDSLQQALTGLSDCSLPPLARSQAESALDAA 582
           AEA R   E   +     LA M   LR PM     A+ G+ D  +      Q ++ +   
Sbjct: 185 AEAARIAAENASSAKSRFLAMMSHELRTPMT----AVIGMGDLLMGTGLNDQQKAFVKTL 240

Query: 583 RK-----LGVLTGDLRKASHGPKAIVSRRAVFDLQRSLRDAHDAVEERAEAKNLALSWFM 637
           R      + +L   L  +      +      F L R + D       RA AK L+LS  +
Sbjct: 241 RSSAGTLMTILNDVLDFSKIEAGQLTLEEIDFSLPRLVDDVVQLFLVRAAAKGLSLSASI 300

Query: 638 APHLAQVYEGDAQRVNETLRLLVESAVGATDKGSIHLSVRRVPDSTDPG----------- 686
           A    +   GD  R+ + L  LV +A+  TD+G+I ++V       DP            
Sbjct: 301 ADDTPRHIRGDPTRLRQVLFNLVSNAIKFTDRGTIEIAVWSPDPPADPPADPPAGAAPAD 360

Query: 687 ---HLLFTVTDTGAGGPPERRST--------------------IALTRAWELVAASNGTL 723
               L F V D G G  PE+R+                     + L     LV A  G +
Sbjct: 361 APVTLRFEVEDNGIGMTPEQRARLFDAFVQADVSTSRKYGGTGLGLAICKRLVEAMGGEI 420

Query: 724 NVDSGP-QGTAVSFSVHLTALS-----GDLTAPRPAVVEDMDAPAAPAPRPRPLRVLIAD 777
            V S P +G+   FS+ L+ L+     G+L A RPA+     A   P P   PLR+L+A+
Sbjct: 421 TVASTPGRGSTFRFSI-LSRLAEAPPVGELGA-RPAL---PGAAETPEPTQVPLRLLLAE 475

Query: 778 DVPSSRQLLTFYLEGLPHETLEARSTDECVGLYRRAPAGLVVFDGDMPEDDIATAVSDIR 837
           D   +R L+   +  + H           +     A    ++ D +MP  D  +    IR
Sbjct: 476 DNDINRMLVVAMMSRIGHRIDAVTDGRAALDALVAADYDALILDMEMPVLDGRSTARAIR 535

Query: 838 AFEGELGLAPVPLLVLVSHDEQGRRLLQTGCSEALAKPITRTSLRETVLRLAPLPVQGVA 897
             +G +   P+  L   +  E     L  G    L KPI    L   ++ LA  P +G  
Sbjct: 536 RMDGPVARIPIVGLSADALPEHRDGHLAAGLDAYLTKPIDWDQLNAVLVDLATRPQEGRV 595

Query: 898 ATGADVASTEAEGSDAPSPAENRAQADTPHEMASLPPDLPTLSLDGTPERAGSLATGGMT 957
                  +TE  G  +  P  +R       ++A L   L   +LDG  +     A   +T
Sbjct: 596 VPVPSRPATEG-GHFSALPLVDRV------KLAELRLALGGEALDGMLQLLPETALRELT 648

Query: 958 ASGTGL 963
           A  + L
Sbjct: 649 AIRSAL 654



 Score = 34.3 bits (77), Expect = 4e-05
 Identities = 38/148 (25%), Positives = 62/148 (41%), Gaps = 9/148 (6%)

Query: 1215 LSAAVRASAIAEEAARTVTHTGKPASADAHASDDRATASDSDAGQSKPLLSAHGELLDAS 1274
            L+A +   A   +  R V    +PA+   H S   A         ++  L+  GE LD  
Sbjct: 579  LNAVLVDLATRPQEGRVVPVPSRPATEGGHFS---ALPLVDRVKLAELRLALGGEALDGM 635

Query: 1275 LAPLVPGLVTTLEAALEDALIGRDQDDTLAVEEASCRIAGKAETFGLRVLERIARCVERA 1334
            L  L    +  L A       GR ++    +++A+  +AG A  FG   +  IAR +  +
Sbjct: 636  LQLLPETALRELTAIRSALQAGRPKE----LKQAAHTLAGLAANFGTPRMAAIARAINDS 691

Query: 1335 AAADDIEAVRDLLPELQAAVERNTLALR 1362
            +   D + V  LLP L+  V   +  +R
Sbjct: 692  ST--DTDKVAALLPLLETTVAATSSLVR 717