Pairwise Alignments

Query, 397 a.a., HD domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 437 a.a., uncharacterized domain HDIG from Kangiella aquimarina DSM 16071

 Score =  107 bits (268), Expect = 5e-28
 Identities = 64/165 (38%), Positives = 86/165 (52%), Gaps = 2/165 (1%)

Query: 192 VDFRSSFTAAHSAGVAEAADALGGYCDLSPERRVVLRIAGLLHDLGKMAVPTSILEKPSG 251
           +  +  +T+ H   V   A A G Y  L  E   VL + G+LHD+GKM VP  IL KP+ 
Sbjct: 184 IKHQDEYTSEHCVRVGILAIAFGKYLQLPRESLEVLGMCGMLHDVGKMKVPQEILNKPAS 243

Query: 252 LTKAEFAFMRQHTFHTYRLLRGVDGLG-GMAAWAAYHHEKLDGSGYPFHLEGRALDPQAR 310
           L+  EF  +++HT   Y  L+   G+   + A A  HHE+++G GYP H E + L    R
Sbjct: 244 LSPEEFDEVKKHTILGYDFLKKHGGIDEQICAVAMNHHERMNGEGYPHHAESQRLSLYDR 303

Query: 311 IIGVADIFTAMAEDRPYRKGQGREGVLRVLRDECTTGRVDGELVE 355
           II + D + AM  DR Y KG      L VL  E  T   D ELV+
Sbjct: 304 IIAIVDSYDAMTSDRCYHKGIPASQALSVLYKE-QTNHYDAELVQ 347



 Score = 30.8 bits (68), Expect = 8e-05
 Identities = 28/112 (25%), Positives = 48/112 (42%), Gaps = 5/112 (4%)

Query: 1   VAFIAGEIAAVLDLPEVLRRRLFVAALLHDVGALS-PEEKMDLYAS----KVEECDTHCI 55
           V  +A      L LP      L +  +LHDVG +  P+E ++  AS    + +E   H I
Sbjct: 198 VGILAIAFGKYLQLPRESLEVLGMCGMLHDVGKMKVPQEILNKPASLSPEEFDEVKKHTI 257

Query: 56  RGARLLHQVDGFGEEGRVLRLHHATLRDGSLADVDEDTARLAQIVHLSDLVD 107
            G   L +  G  E+   + ++H    +G       ++ RL+    +  +VD
Sbjct: 258 LGYDFLKKHGGIDEQICAVAMNHHERMNGEGYPHHAESQRLSLYDRIIAIVD 309