Pairwise Alignments

Query, 540 a.a., sensory box histidine kinase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 678 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score =  254 bits (649), Expect = 7e-72
 Identities = 163/406 (40%), Positives = 225/406 (55%), Gaps = 14/406 (3%)

Query: 133 DVTRRVRAERELADTLATYRSLYDSVMDAIIVIDGAR-IADCNNIAERLFGLHRGKLIGR 191
           +V  R + E++L        S+ DS+  A+I +D    +   N  A  L G    + + +
Sbjct: 271 EVQVRSKIEKKLTGFQNYLNSIIDSMPSALIALDEQLYVTQWNQEASALSGTRLDEALNQ 330

Query: 192 SIHEMSPPLQPDGRPSPQMALQHIEAAIRGRS-HRFDWVHIGAEGVPFRAEVSLSPLKHE 250
            I+    PL+P         L  I AA+   +  R + V    +       ++  PL   
Sbjct: 331 PIYLAFQPLKP--------YLPQIRAAVEQHTVERIERVTWFKDDEAKHYALTFYPLMGG 382

Query: 251 THDYCIAVIRDVTEQHRMRELMIQTEKMHSVGGVAAGMAHEINNPLSAIAQAAQNIERRL 310
                +  I D+T++  + E+M+Q+EKM SVGG+AAGMAHEINNPL AI    QNI RRL
Sbjct: 383 AGRGVVIRIDDITQRLSLEEMMVQSEKMLSVGGLAAGMAHEINNPLGAILHNVQNIRRRL 442

Query: 311 ATDLAGNIKAASVTGMDLEALRNYLEARGVPMLLGHIRDACARAATIVRNMLDFSRRSDS 370
           + DL  N++ A   G++LE +  YL++R VP LL  I+ A ARAA IV +ML FSRRS+ 
Sbjct: 443 SPDLPKNLEHAQQAGIELETVNRYLQSREVPQLLDGIQQAGARAAKIVTHMLSFSRRSNR 502

Query: 371 SRTTCDIEAIIRKALALADNDYDLRKHHDFRSIHISFDCPDDLPTITCVPTELEQVIFNL 430
               CD+ A+I +A+ +A ND+DL    DF+   I       L  +     ELEQV+ NL
Sbjct: 503 QMAPCDLPALIDQAVEIAGNDFDLAIGFDFKGQAIIRQFDPQLGPVPGTANELEQVLLNL 562

Query: 431 LKNASEAFADIDATDRREDPAIHIAVTTEESYDGLRLAISDNGPGMHEALRRRVFEPFFT 490
           LKNA++A   I   +   +P   I + T  +     + + DNG GM E +R+R FEPFFT
Sbjct: 563 LKNAAQA---IHLREDDSEPG-RIILRTRLNPPWAEIQVEDNGIGMSENVRKRTFEPFFT 618

Query: 491 TKPPGKGTGLGLSVSYFIITQNHGGEMWVESQPGAGTTFVIRLPSA 536
           TK  G+GTGLGLSVSYFIIT NH G+M V S  G GT F +RLP A
Sbjct: 619 TKEIGQGTGLGLSVSYFIITNNHKGQMEVHSTLGQGTCFTLRLPLA 664