Pairwise Alignments

Query, 540 a.a., sensory box histidine kinase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 1037 a.a., sensory box histidine kinase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  333 bits (855), Expect = 1e-95
 Identities = 215/556 (38%), Positives = 309/556 (55%), Gaps = 43/556 (7%)

Query: 9    IRKQLIGFGEDSVRKSYYPELR---RNLQQVERFRALLESSGDA----IFTLDAATGIVM 61
            +  QL+  GE + R +   ++    R  Q++   R LLE   D+    IF  DAA G  M
Sbjct: 486  LSSQLMVIGEANYRLTVVRDMTERYRAEQELHEKRLLLEGILDSVPVSIFWKDAA-GRFM 544

Query: 62   DCNHSAQRLAERDTLEGIALGD-----ILPGIP--------------APPFSGTQRLELT 102
             CN +  ++   DT E +   D     +LPG+               +P     +RL   
Sbjct: 545  GCNRTFAQMVGLDTPETVIGKDDADLGLLPGLAETFREADRKVMATLSPMLGYVERLAFA 604

Query: 103  KEVAGWKMHLDVMLEPQPIDGGRYASCI--VRDVTRRVRAERELADTLATYRSLYDSVMD 160
                G +  L+    P     GR    +  +RD+T  + A+ +L  +   +  L+    +
Sbjct: 605  D---GRERMLETSKLPLLAADGRAVGVLGLIRDITESLAAQEQLRQSEERFSRLFRYSPE 661

Query: 161  AIIVIDGA--RIADCNNIAERLFGLHRGKLIGRSIHEMSPPLQPDGRPSPQMALQHIEAA 218
            A+ ++D A  R AD N+  ERL G    +L+GR   EM+     D     ++ L+ I   
Sbjct: 662  AMALVDMADQRFADVNHAFERLTGYEASELVGRGTIEMA--FYTDATTRAEL-LRRIHT- 717

Query: 219  IRGRSHRFDWVHIGAEGVPFRAEVSLSPLKHETHDYCIAVIRDVTEQHRMRELMIQTEKM 278
              G    +++     EG P    +S S L      + + ++RD+TE  RM+E+MIQTEKM
Sbjct: 718  -EGFVDNYEFEGRTKEGTPMPCSISCSILSIGDRRFILGLVRDITEMKRMQEVMIQTEKM 776

Query: 279  HSVGGVAAGMAHEINNPLSAIAQAAQNIERRLATDLAGNIKAASVTGMDLEALRNYLEAR 338
             SVGG+AAG+AHEINNPL  I QAA N+ +R   D A N+  A+  G+D++ALR Y+  R
Sbjct: 777  ISVGGIAAGIAHEINNPLGIILQAAHNLAQRTRPDFAKNLDVATRVGLDMDALRQYMAQR 836

Query: 339  GVPMLLGHIRDACARAATIVRNMLDFSRRSDSSRTTCDIEAIIRKALALADNDYDLRKHH 398
             + + +  IRDA  RA+ I+R+MLDFSR   S R  CD+ +I+ KA+ALA +DYDL+K +
Sbjct: 837  KLDVFIEDIRDAAVRASAIIRHMLDFSRSGGSKRVPCDVTSILDKAVALAGSDYDLKKSY 896

Query: 399  DFRSIHISFDCPDDLPTITCVPTELEQVIFNLLKNASEAFADIDATDRREDPAIHIAVTT 458
            DFR I I+ D    LP + C PTELEQV+ NLL+NA+ A A+       E PAIH+ V  
Sbjct: 897  DFRRITITRDYEAGLPLVDCSPTELEQVLLNLLRNAAHALAESHRDG--EGPAIHLRVRR 954

Query: 459  EESYDGLRLAISDNGPGMHEALRRRVFEPFFTTKPPGKGTGLGLSVSYFIITQNHGGEMW 518
            ++  + + + + DNGPG+  AL+RR+FEPF+TTKPPG GTGLGLSVSYFI+T+ HGG + 
Sbjct: 955  QD--ETVVIDVQDNGPGIPVALQRRIFEPFYTTKPPGVGTGLGLSVSYFIVTKGHGGNLT 1012

Query: 519  VESQPGAGTTFVIRLP 534
            V + P  GT F I LP
Sbjct: 1013 VVTPPEGGTLFRIELP 1028



 Score = 55.8 bits (133), Expect = 8e-12
 Identities = 74/273 (27%), Positives = 117/273 (42%), Gaps = 29/273 (10%)

Query: 30  RRNLQQVE-RFRALLESSGDAIFTLDAATGIVMDCNHSAQRL--AERDTLEGIALGDILP 86
           +  LQQ E RF  L   S D+I      TG+V+D N S  +L    RD + G +L DI  
Sbjct: 388 QERLQQSEKRFATLFRLSPDSIVLSSFDTGLVVDVNDSFCQLHGLGRDEVVGRSLRDI-- 445

Query: 87  GIPAPPFSGTQRLELTKE-------------VAGWKMHLDVMLEPQPIDGGRYASCIVRD 133
           G+   P      + L +E             + G +++L +  +   I    Y   +VRD
Sbjct: 446 GLYDDPAQLDGIITLVREKGRVVDLELRARSLKGEELYLSLSSQLMVIGEANYRLTVVRD 505

Query: 134 VTRRVRAERELADTLATYRSLYDSVMDAIIVIDGA-RIADCNNIAERLFGLHRGK-LIGR 191
           +T R RAE+EL +       + DSV  +I   D A R   CN    ++ GL   + +IG+
Sbjct: 506 MTERYRAEQELHEKRLLLEGILDSVPVSIFWKDAAGRFMGCNRTFAQMVGLDTPETVIGK 565

Query: 192 SIHEMS--PPLQPDGRPSPQMALQHIEAAIRGRSHRFDWVHIGAEGVPFRAEVSLSPLKH 249
              ++   P L    R + +  +  +   + G   R  +    A+G     E S  PL  
Sbjct: 566 DDADLGLLPGLAETFREADRKVMATLSPML-GYVERLAF----ADGRERMLETSKLPLLA 620

Query: 250 ETHDY--CIAVIRDVTEQHRMRELMIQTEKMHS 280
                   + +IRD+TE    +E + Q+E+  S
Sbjct: 621 ADGRAVGVLGLIRDITESLAAQEQLRQSEERFS 653