Pairwise Alignments

Query, 432 a.a., oxidoreductase, selenocysteine-containing (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 461 a.a., HmcF, 52.7 kd protein in hmc operon (voordouw) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  141 bits (356), Expect = 4e-38
 Identities = 120/421 (28%), Positives = 174/421 (41%), Gaps = 53/421 (12%)

Query: 30  LNLCLTCGACSAGCPATGLEDMDPRK-------------FLRMAALGMDEEVTTTPWVW- 75
           L +C  CG C+  C    + D DP++               R   +     +      W 
Sbjct: 60  LEICAHCGMCADSCFLYRVNDRDPKQVPAYKIQSTLGEIIRRKGKVDTQFMLHAMEVAWS 119

Query: 76  MCTMCMRCMYVCPMQINIPQLVYHARASWPREKRPRGIVN---SCDAALKTESNSAMGAS 132
            CT C RC   CP  I++  +  + R     +    G V       + +     + M  +
Sbjct: 120 QCTCCNRCGQYCPHGIDMGVMFSYLRGLLYSQ----GFVPWELKIGSGMHRVYGAQMDVT 175

Query: 133 PDDFAYVVEDVLEEVRSTQPGQEKLTAPVDKHGAMYFLNQNSREPVTEPDEMVPLWKILD 192
            +D+    E + EE +   PG E    PVD   A      N+REP   P+++     +  
Sbjct: 176 TEDWVETCEWMAEEQQEEWPGLE---IPVDVENADIMYVLNAREPKHYPEDVAEAAILFH 232

Query: 193 MAGADWTYGSVGWAAENYCMFAADDEAWETIVRNKVKAVEDLGCKVWLNTEUGHELYAIR 252
           +AG +WT  S GW   +  MFA D  A +  V     A+E L  K  + TE GH   A  
Sbjct: 233 IAGENWTVPSEGWEQTSLAMFAGDWAACKMQVERVYAAIERLKPKCVVGTECGHAHRASA 292

Query: 253 SGLQKFNIKPKFEIESIIRLYARWI----REGKLPVSSEWNRERKVKFTVQDPCQLVR-- 306
                +      +  +    Y  W+    R GK+ +  E  +  K   T+QD C  +R  
Sbjct: 293 IEGPYWAGYEDGKTPAPWLHYVEWVAMALRTGKIKIDPE--KRIKEPVTLQDSCNYIRNH 350

Query: 307 ------KSFGDPVADDLRFVAKAVCGEENVIEMWPNRSNNYCCGGGGGFLQSG-YPEARR 359
                 +     +ADD R             EM PNR +NYCCGGGGGF   G + + R 
Sbjct: 351 GLAKCTREIMSYIADDFR-------------EMTPNREHNYCCGGGGGFNGIGKFRKQRN 397

Query: 360 YYGRLKNEQIVATGAPYVIAPCHNCHSQISDLSDHYGAGYRVVHLWTLIALSLGILGENE 419
              + K +QI+ATGA  V+APCHNC   I DL + Y  G R   L  LI + + I+ E+ 
Sbjct: 398 KALQTKRDQILATGAKLVVAPCHNCWDAIRDLEEEYRIGIRWSFLKPLI-IKMAIIPEHL 456

Query: 420 R 420
           R
Sbjct: 457 R 457