Pairwise Alignments

Query, 233 a.a., membrane protein, putaive (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 260 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score =  182 bits (461), Expect = 7e-51
 Identities = 104/248 (41%), Positives = 142/248 (57%), Gaps = 20/248 (8%)

Query: 4   RTMGSAARVEATNAYMRGVYSWMTLGLAVTAAAAWGVAS-------SEALIAFIFGNTFV 56
           R    A   E   AYM  VY+ M L L +T  AA+G A        + A+     G    
Sbjct: 15  RAQSGAMIDEGLRAYMLKVYNLMALALVITGVAAFGFAMLATTTDPAAAVATLPNGKMLT 74

Query: 57  FFGLII-----------AEFALVIGISAGIARLSAGMASGLFLLYSALNGLTLSSILLVY 105
             G ++           A   LV  +S  I  +S   A   F +Y+AL G++LSSI L Y
Sbjct: 75  SLGALVYASPLRWVVMLAPLGLVFFLSFRIQNMSVSAAQSTFWVYAALMGVSLSSIFLRY 134

Query: 106 AQSAVFQAFITTAGMFAVMSIYGATTKRDLTSMGSFLMMGLFGIILASVVNIFMRSSMME 165
            + ++ Q F  TA  F  +S+YG TTK+DL+ +GSFL+MGLFG+I+AS+VNIF+ S  ++
Sbjct: 135 TEGSIVQTFFVTAASFGALSLYGYTTKKDLSGIGSFLIMGLFGLIIASIVNIFLGSGALQ 194

Query: 166 FIISAVGVLVFTGLTAYDTQKLKAFGENAPMDDAVAIRRGTILGALTLYLDFVNLFIMMV 225
           F ISA+GVL+F GLTAYDTQK+K    +A  DD     R  I+GALTLYLDF+NLF  ++
Sbjct: 195 FAISAIGVLIFAGLTAYDTQKIKEMYFDA--DDVAVAGRKAIMGALTLYLDFINLFTFLL 252

Query: 226 RLFGSSRD 233
           +  G+  D
Sbjct: 253 QFLGNRND 260