Pairwise Alignments

Query, 339 a.a., oligopeptide ABC transporter, permease protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 339 a.a., dipeptide ABC transporter permease DppB from Dickeya dadantii 3937

 Score =  207 bits (526), Expect = 4e-58
 Identities = 116/335 (34%), Positives = 185/335 (55%), Gaps = 18/335 (5%)

Query: 16  MLRKLAWMVVVFLGITVICFWVIHLAPGSPTDLETTMNPLAGAEARKRLESIYGLDQPLY 75
           +LR+L  ++  F+GIT++ F  +HL PG P  +      ++  E   +L +  GLD+PL+
Sbjct: 5   ILRRLGLVIPTFIGITLLTFAFVHLIPGDPVMIMAGERGIS-PERHAQLMAELGLDKPLW 63

Query: 76  VQYAQWLGRLVRLDFGNSMSSDGRPVMERIRERLPLTVGMNVAALFLTLLLAVPIGVASA 135
            QY  ++  ++  D G S+ S   PV +    R   T+ + V A+   +++ +P+GV +A
Sbjct: 64  EQYLHYINGVLHGDLGMSLKSR-IPVWDEFVPRFKATLELGVCAMIFAVIVGIPVGVLAA 122

Query: 136 HWQGGWFDRGMTVLVFIGFAMPGFWLALLLMLFFGIHLGW----------------LPLS 179
             +G  FD     +   G++MP FW  ++L++   + L                  LPL+
Sbjct: 123 VKRGSVFDHTAVSIALTGYSMPIFWWGMMLIMLVSVQLNLTPVSGRVGDTVFLDDSLPLT 182

Query: 180 GLTSLDYATLSPWGKFLDVARHLALPLFIYTFGSLAGMSRFMRSAMLEVLRQDYILTARA 239
           G   +D       G F D   H+ LP  +     LA + R  RSAMLEVL +DYI TARA
Sbjct: 183 GFMLIDTLIWGAEGDFKDAVMHMLLPAVVLGTIPLAVIVRMTRSAMLEVLGEDYIRTARA 242

Query: 240 KGLPTRTVIFRHALRNALLPVITILGLSLPGLIGGSVIIESIFALPGLGQLFYTAVMARD 299
           KGL    VI  HALRNA+LPV+T++GL +  ++ G+++ E+IF+ PGLG+    A+  RD
Sbjct: 243 KGLGRLRVIVVHALRNAMLPVVTVIGLQVGTMLAGAILTETIFSWPGLGRWLIDALQRRD 302

Query: 300 YPLIMGNLVLGAVLTQAGNLIADLCYGLADPRIRN 334
           YP++   ++L A +    NL+ D+ YG+ +PRIR+
Sbjct: 303 YPVVQSGVLLVATMIILVNLLVDVLYGVVNPRIRH 337