Pairwise Alignments

Query, 339 a.a., oligopeptide ABC transporter, permease protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 333 a.a., ABC transporter, membrane spanning protein (peptide) from Agrobacterium fabrum C58

 Score =  207 bits (528), Expect = 2e-58
 Identities = 117/332 (35%), Positives = 185/332 (55%), Gaps = 2/332 (0%)

Query: 1   MPAPASTRLTALARRMLRKLAWMVVVFLGITVICFWVIHLAPGSPTDLETTMNPLAGAEA 60
           M   +  RLT + R +LR L   V     I  + F+V+ LAPG   D     +  A  E 
Sbjct: 1   MGGSSMKRLTRVGRSLLRNLIQAVPTMFVIVTLGFFVLQLAPGDAADYMAAESGAATQET 60

Query: 61  RKRLESIYGLDQPLYVQYAQWLGRLVRLDFGNSMSSDGRPVMERIRERLPLTVGMNVAAL 120
              +   +GLD PL  Q A +   L     G S    G PV + I ERLP T+ + V A+
Sbjct: 61  VADIRRAFGLDLPLLDQLANYYTSLAHFSLGISPRY-GVPVADLIMERLPGTLTLMVLAI 119

Query: 121 FLTLLLAVPIGVASAHWQGGWFDRGMTVLVFIGFAMPGFWLALLLMLFFGIHLGWLPLSG 180
            + LL+ +  G   A       DR ++V   + +++P FW+ L+ ++ F + LGWLP  G
Sbjct: 120 VIALLVGIAAGTIMALNATRAADRILSVASLLFYSVPTFWIGLIFIIVFSVKLGWLPAGG 179

Query: 181 LTSLDYATLSPWGKFLDVARHLALPLFIYTFGSLAGMSRFMRSAMLEVLRQDYILTARAK 240
           + ++  A+   +G  +D   +  LP        +A  +R  RS++LEV+ QD++ TA+AK
Sbjct: 180 MKTIG-ASSGGFGWLIDRVSYALLPATSLALYYMAIYARLTRSSILEVIGQDHVRTAKAK 238

Query: 241 GLPTRTVIFRHALRNALLPVITILGLSLPGLIGGSVIIESIFALPGLGQLFYTAVMARDY 300
           GL  R V+ RH LRNAL+P+ T+ G+ + G++GG+++IE++F+ PG+G+L + AVMAR+Y
Sbjct: 239 GLAPRQVVLRHVLRNALIPITTVAGIHVAGILGGAIVIETVFSWPGMGRLAFDAVMAREY 298

Query: 301 PLIMGNLVLGAVLTQAGNLIADLCYGLADPRI 332
            L++G +++ +VL    N I D+     DPRI
Sbjct: 299 TLLLGIMLVSSVLVICVNAIVDIIQAALDPRI 330