Pairwise Alignments

Query, 339 a.a., oligopeptide ABC transporter, permease protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 302 a.a., dipeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  213 bits (542), Expect = 5e-60
 Identities = 119/311 (38%), Positives = 187/311 (60%), Gaps = 11/311 (3%)

Query: 23  MVVVFLGITVICFWVIHLAPGSPTDLETTMNPLAGAEARKRLESIYGLDQPLYVQYAQWL 82
           +VV+FL +T++ F ++ + PG P  +   + P A A+    L +  GLDQ L VQY  ++
Sbjct: 2   IVVMFLVVTIV-FVILRVTPGDPAAV--MLGPDATAQDIAELRTRLGLDQSLGVQYVYYI 58

Query: 83  GRLVRLDFGNSMSSDGRPVMERIRERLPLTVGMNVAALFLTLLLAVPIGVASAHWQGGWF 142
           G+L++ D G S+  +  PV   + +R   T  + + +L +  ++A+PIG+ +A+ +G + 
Sbjct: 59  GQLLKGDLGQSIFLN-MPVGSALLDRAEPTFFLTIFSLLIAGVIALPIGIYAAYRRGSFV 117

Query: 143 DRGMTVLVFIGFAMPGFWLALLLMLFFGIHLGWLPLSGLTSLDYATLSPWGKFLDVARHL 202
           D+  T +  +  ++P FWL L+LM FF + L   P+SG          P   FL+   HL
Sbjct: 118 DQAATTIAMLAASIPSFWLGLILMQFFAVRLDLFPVSGYGG-------PGASFLERMYHL 170

Query: 203 ALPLFIYTFGSLAGMSRFMRSAMLEVLRQDYILTARAKGLPTRTVIFRHALRNALLPVIT 262
            LP       S A + RF R++ML+VL  DY+ TARAKG+  R V+ +HAL+NAL+P++T
Sbjct: 171 TLPAIALGLVSSALILRFTRASMLDVLGDDYVRTARAKGVKERRVVMKHALKNALIPILT 230

Query: 263 ILGLSLPGLIGGSVIIESIFALPGLGQLFYTAVMARDYPLIMGNLVLGAVLTQAGNLIAD 322
           +LGL+   LI G+V+ E++F LPG+G L  +AV+ RDYP+I G L++ A L    N   D
Sbjct: 231 VLGLTAAVLISGAVVTETVFGLPGVGNLVVSAVLRRDYPVIQGALLVIAGLYVLINFAID 290

Query: 323 LCYGLADPRIR 333
           + Y L DPR+R
Sbjct: 291 MLYLLVDPRVR 301