Pairwise Alignments

Query, 411 a.a., efflux transporter, RND family, MFP subunit (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 404 a.a., efflux RND transporter periplasmic adaptor subunit from Dickeya dianthicola ME23

 Score = 98.6 bits (244), Expect = 3e-25
 Identities = 95/395 (24%), Positives = 169/395 (42%), Gaps = 61/395 (15%)

Query: 37  TATVTRGEVRKTLEATGIIKPQVGAVVKTGSRFTGIIRKLHVKVGDRVEKDEVIAEIDDR 96
           TATV    +++T+ A G +  +   +V  G++ +G IR L+V +GD+V++ +++AEIDD 
Sbjct: 39  TATVDVRSLQQTVLADGTVNAR--KLVSVGAQVSGQIRALNVSLGDKVKQGQLLAEIDDL 96

Query: 97  EQRAQLDEAEAKLRQAEAEAARVETSYPLQIREAEAQVQAARAESEYAALTMERKRKLVE 156
            Q+  L +++A L   +A+ A                  + +A      L  +R+  L++
Sbjct: 97  TQQNTLRDSKAALDDIQAQRA------------------SRQATLRNNQLNWQRQHNLMQ 138

Query: 157 QDLDARNSLDEAQQRSRSLSNVLVAREATLDRLRNEFRTERKRTRQAAEQAKAALETARI 216
           + L  +   D A+              ATLD  + +      +      +A  A+ TA++
Sbjct: 139 KGLGVQADYDSAK--------------ATLDAAQADIHALDAQI----VRANIAVNTAQV 180

Query: 217 RLSYAVIRSPISGIVSQVTAPEGETVVAGFQVVNLITILDPSRLEMWIYVDETDVGQVRP 276
            L+Y  I SPI+G V  +   +G+TV A      +  +     + +   + E DV  VR 
Sbjct: 181 NLAYTKIVSPIAGTVVALPVEQGQTVNAVQSTPTIAKVATLDTMTIEAKISEADVINVRT 240

Query: 277 GLDVEFRVDSQPEKTFRGVVDQIYPQPEIRDN---------------------IVYYQAL 315
           G+ V F +   P K ++ V+  I P PE   N                      +YY  L
Sbjct: 241 GMPVWFTILGAPNKRYQAVLRAIEPAPESLSNESAATSNSTTGSSASSSSSRSAIYYNGL 300

Query: 316 VRLDPATSEHLRPEMTTQCRIIVASKKDVLVIPNDAIKWVDGGRVVFI-DDGGKVRRVKP 374
             +D    E LR  MT Q  I+++  K  +V P  A+    G   V +    G+    + 
Sbjct: 301 FDVD-NPDETLRISMTAQVYILLSEAKRAIVAPVSALINRQGKLFVQVTQPQGRPELREV 359

Query: 375 VLGTAGPDVTEVVEGLAEGQKVGVRVELPGASKGA 409
             G +     +++ G+  G++V +  +      GA
Sbjct: 360 TTGISDNAYIQLLSGVQPGEEVVISQQEASDGSGA 394