Pairwise Alignments

Query, 411 a.a., efflux transporter, RND family, MFP subunit (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 428 a.a., RND family efflux transporter, MFP subunit from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  101 bits (251), Expect = 5e-26
 Identities = 98/416 (23%), Positives = 187/416 (44%), Gaps = 53/416 (12%)

Query: 9   ILALILCSIAVGVWLYARRGTADPVIRETATVTRGEVRKTLEATGIIKPQVGAVVKTGSR 68
           +  +++  I +G  L    G A+  + ET   ++  + + + A+G+I+P+    VK    
Sbjct: 16  VAGVLILFIIIGRALGWVGGAAETEV-ETTKASKKTIVEKVSASGVIEPETE--VKLSPD 72

Query: 69  FTGIIRKLHVKVGDRVEKDEVIAEIDDREQRAQLDEAEAKLRQAEAEAARVETSYPLQIR 128
             G I +L++  GD V++++++ +I      + LD   A L Q +A  A           
Sbjct: 73  VAGEIIELNISEGDSVKQNDLLVKIRPDNFISALDRTRANLNQQKANLA----------- 121

Query: 129 EAEAQVQAARAESEYAALTMERKRKLVEQDLDARNSLDEAQQRSRSLSNVLVAREATLDR 188
           +++A ++ + A  + A L  ER + L E ++ + +  ++A     S  N L A + +++ 
Sbjct: 122 QSQAALKRSEALFDRAKLQYERNKSLYESNVISDSEFEQATADYVSAENDLKAAQQSVEA 181

Query: 189 LRNEFRTERKRTRQAAEQAKAALETARIRLSYAVIRSPISGIVSQVTAPEGETVVAGFQV 248
                           + ++A++E A   L    + +P  GIVS++   +GE VV   Q+
Sbjct: 182 -----------AEYVVKSSQASVEEANENLRLTNVFAPTDGIVSKLLVEKGERVVGTQQM 230

Query: 249 --VNLITILDPSRLEMWIYVDETDVGQVRPGLDVEFRVD--SQPEKTFRGVVDQI---YP 301
               ++ I D S +E+ + V+E D+ ++  G      VD  S   + F GVV  I     
Sbjct: 231 AGTEMLRIADLSVMEVVVDVNENDIVRISLGDTTIIEVDAYSHTGEKFTGVVTSIANSAN 290

Query: 302 QPEIRDNIVYYQALVRLDPATSEHL---------RPEMTTQCRIIVASKKDVLVIPNDAI 352
           +   +D +  ++  +R+   + E L         RP MT    II   K DVL +P  A+
Sbjct: 291 EKATQDAVTEFEVEIRILNESYEKLITKENRYPFRPGMTASVEIITEKKADVLSVPLAAV 350

Query: 353 KWVDGGRV------------VFIDDGGKVRRVKPVLGTAGPDVTEVVEGLAEGQKV 396
              D  RV            +F+ +G K    +   G +  +  E++EG+ EG+++
Sbjct: 351 TTRDDIRVDSTNAESDLQEIIFMSEGNKAHLTRVKTGISDFENIEILEGIKEGEEL 406